Query= MSMg01no465_p19.b1 MSMg01no465_p19.b1 CHROMAT_FILE:
MSMg01no465_p19.b1 PHD_FILE: MSMg01no465_p19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:18 2005
(536 letters)
>mm_chr14_24217139_24218078
Length = 940
Score = 1002 bits (518), Expect = 0.0
Identities = 533/540 (98%), Gaps = 4/540 (0%)
Strand = Plus / Minus
Query: 1 gatgggaagtgtcttgctgatgccgcacatgagatctaggccttggatcaagaagccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gatgggaagtgtcttgctgatgccgcacatgagatctaggccttggatcaagaagccagg 681
Query: 61 gctcctgaccaggagaccctttcctttactctgccaagcttgatctagccactaggatca 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gctcctgaccacgagaccctttcctttactctgccaagcttgatctagccactaggatca 621
Query: 121 atttactagtaaacctcaccaggggctcaagtctgtgggagagtcatcgatgtgtgaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atttactagtaaacctcaccaggggctcaagtctgtgggagagtcatcgatgtgtgaggt 561
Query: 181 gtgtgtaacgacattagagggacttcaaagtctagttggggacacattagagcaggaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtgtgtaacgacattagagggacttcaaagtctagttggggacacattagagcaggaaat 501
Query: 241 aagttaataactg----aactaaggagatgacagggagtaatatgagaagagccaagaaa 296
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aagttaataacagaactaactaaggagatgacagggagtaatatgagaagagccaagaaa 441
Query: 297 gtcttaaagaagacagtctacctcatttaggaacgtttttctggaaagggagagggtagc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtcttaaagaagacagtctacctcatttaggaacgtttttctggaaagggagagggtagc 381
Query: 357 ctgtttcttgaaggctcagtagactaatacattgggaaggaggtatcacctcccccatcc 416
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttgtttcttgaaggctcagtagactaatacattgggaaggaggtatcacctcccccatcc 321
Query: 417 cattacttaactaccctgccaatgtatgtctatcatctcatggcccccccaccagaaatc 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cattacttaactaccctgccaatgtatgtctatcatctcatggcccccccaccagaaatc 261
Query: 477 caggaaaaagagccccttacagtcagacagcacacgtttcctgtaatttagagggaacag 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 caggaaaaagagccccttacagtcagacagcacacgtttcctgtaatttagagggaacag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 940
Length adjustment: 10
Effective length of query: 526
Effective length of database: 930
Effective search space: 489180
Effective search space used: 489180
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no465_p19.g1 MSMg01no465_p19.g1 CHROMAT_FILE:
MSMg01no465_p19.g1 PHD_FILE: MSMg01no465_p19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:18 2005
(458 letters)
>mm_chr14_24051947_24052801
Length = 855
Score = 808 bits (418), Expect = 0.0
Identities = 447/458 (97%), Gaps = 3/458 (0%)
Strand = Plus / Plus
Query: 1 tctccaaaggcagagattgggtccctctgtgttgaccctatttatgaaaaggagaggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctccaaaggcagagattgggtccctctgtgttgaccctatttatgaaaaggagaggagg 260
Query: 61 agagagggcctaccaaaagagagaggagaagagacttgggcctttcaaaactcagctctt 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 agagagggcctaccaaaagagagagg---agagacttgggcctttcaaaactcagctctt 317
Query: 121 cccataatgcagtggagagagtttcaatgaattcaatggtgagggttttttggttttttt 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 318 cccataatgcagtggagagagtttcaatgaattcaatggagagggttttttgggtttttt 377
Query: 181 ccttcagtcagaatgatcccagacccaggctaacaggaaaggtggatcccagggaggcca 240
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ccttccctcagaatgatcccagacccaggctaacaggaaaggtggatcccagggaggcca 437
Query: 241 tagctgccctttcctgtcctctccatctctgaagctggcctcgggttgtcacacaagcaa 300
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tagctgcccttccctggcctctccatctctgaagctggcctcgggttgtcacacaagcaa 497
Query: 301 gcacaccagaacaagttaatttgtaatcttaggaggaaaatgattgtggcgctgtatctg 360
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 498 gcacaccagaacaagttaatttgtaatcttaggaggagaatgattgcggcgctgtatctg 557
Query: 361 tcactgggcgctcttcctgccagtctaaacagctgattagttagcgcccctggaatcgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tcactgggcgctcttcctgccagtctaaacagctgattagttagcgcccctggaatcgat 617
Query: 421 ccgcatcagttccacctgcatgcacccaccaggaacca 458
||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ccgcatcagttccacctgcatgcacccaccaggaacca 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 855
Length adjustment: 10
Effective length of query: 448
Effective length of database: 845
Effective search space: 378560
Effective search space used: 378560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
