Query= MSMg01no466_g14.b1 MSMg01no466_g14.b1 CHROMAT_FILE:
MSMg01no466_g14.b1 PHD_FILE: MSMg01no466_g14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:53 2005
(439 letters)
>mm_chr14_15479751_15480589
Length = 839
Score = 826 bits (427), Expect = 0.0
Identities = 436/439 (99%)
Strand = Plus / Plus
Query: 1 ccagcagatctctcacctcccatgtaaaagagttccatccctggaatagtcaaaaagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccagcagatctctcacctcccatgtaaaagagttccatccctggaatagtcaaaaagaaa 260
Query: 61 aacaaaaacagatcctattgttgaagttacctacagctaataaaagagtcattaagtaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacaaaaacagatcctattgttgaagttacctacagctaataaaagagtcattaagtaag 320
Query: 121 cacaaggtagaaagtagctgttaccattccgaggaaaccactggcctttggaaagcacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacaaggtagaaagtagctgttaccattccgaggaaaccactggcctttggaaagcacag 380
Query: 181 aatgcctatcccatacctcgagttaatagcttcatgagatcctatcccatgtttctcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 aatgcctatcccatacctcgagttaatagcttcatgagatcctatcccatgttcctcttg 440
Query: 241 ttaatttggaaagaatgactaatccctccctttatactatttttggaaacttatttggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaatttggaaagaatgactaatccctccctttatactatttttggaaacttatttggca 500
Query: 301 aacatagaaaaaatggacaaaactaataatatctaatatgtcatgctcacaacttacaaa 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacatagaaaaaatggacaaaattaataatatctaatatgtcatgctcacaacttacaaa 560
Query: 361 gccttttccattcaatccccacacagctcccacatgtagagctttgtcctggctcccaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 gccttttccattcaatccccacacagctcccacatgtagagctttgtcctgactcccaga 620
Query: 421 gttatgaggcaaagccaga 439
|||||||||||||||||||
Sbjct: 621 gttatgaggcaaagccaga 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no466_g14.g1 MSMg01no466_g14.g1 CHROMAT_FILE:
MSMg01no466_g14.g1 PHD_FILE: MSMg01no466_g14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:53 2005
(449 letters)
>mm_chr14_15648820_15649669
Length = 850
Score = 737 bits (381), Expect = 0.0
Identities = 401/409 (98%), Gaps = 4/409 (0%)
Strand = Plus / Minus
Query: 1 cttctgtgtctctgttaagcag-atatcacacgtgtagactgcttatctcatagataggg 59
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 406 cttctgtgtctctgttaagcagaatatcacacgtgtagactgcttatctcacagataggg 347
Query: 60 acccaagagactggtaagaaatgaggaccaaccctaacctagagatccatgccctttgtg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 acccaagagactggtaagaaatgaggaccaaccctaacctagagatccatgccctttgtg 287
Query: 120 acctactttttgcatctaaaacccatttttcccaacagtcctacgactgtggcccaagtg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 acctactttttgcatctaaaacccatttttcccaacagtcctacgactgtggcccaagtg 227
Query: 180 tttgcatgagtgaaaagtgtcatatcaaacaacacccttcacaagagtcacaaatattat 239
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 226 tttgcatgagtgaaaactgtcatatcaaacaacacccttcacaagagtcacaaatactat 167
Query: 240 aagataactgagtgtgactctaactaaggaagtgaaagaactatatgataagaacttcag 299
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 166 aagataactgagtgtgactctaactaaggaagtgaaagatctatatgataagaacttcag 107
Query: 300 gtctctgaagaaaaaaaatctaagaagatctcagaagatggcaagctctgccatgctcat 359
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 106 gtctctgaagaaaaaaaatct---aagatctcagaagatggcaagctctgccatgctcat 50
Query: 360 ggattggcaggattaatatagtcaaaatggctatgttgctaaaagcaat 408
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 ggattggcaggattaatatagtcaaaatggctatgttgctaaaagcaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 850
Length adjustment: 10
Effective length of query: 439
Effective length of database: 840
Effective search space: 368760
Effective search space used: 368760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
