Query= MSMg01no466_o04.b1 MSMg01no466_o04.b1 CHROMAT_FILE:
MSMg01no466_o04.b1 PHD_FILE: MSMg01no466_o04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:33 2005
(350 letters)
>mm_chr14_26802002_26802751
Length = 750
Score = 574 bits (297), Expect = e-168
Identities = 343/371 (92%), Gaps = 24/371 (6%)
Strand = Plus / Minus
Query: 1 tttgactaacacagccacctaggaggaatttgaagaaattaccacagaggagaagttgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tttgactaacacagccacctaggaggaatttgaagaaattaccacagaggagaagttgaa 323
Query: 61 gttggaagagtgcagattcttctggataattttgcatctaccctaacacctctctgtata 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 322 gttggaagagtgcagattcttctgggtaattttgcatctaccctaacacctctctgtata 263
Query: 121 tggttttacttctgagctctctagattgtacctgtattttatttttataatcatcatcgc 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 262 tggttttacttctgagctctctagagtgtacctgtattttatttttataatcatcatcgc 203
Query: 181 catcctctcccctcctcctcctcctcctcctg-t--------tcctcctgctcctgctcc 231
||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 202 catcctctcccctcctcctcctcctcctcctcctcctcctactcctcctgctcctgctcc 143
Query: 232 tcctcctgctcctgctcctcctcctcctcctgctcct---------gctcctcctcctcc 282
||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 142 tcctcctgctcctgctcctcctcctcctcctgctcctcctcctcctgctcctcctcctcc 83
Query: 283 t---gctcctgctcctcctcctgctcctgctcctcctcctcctcctcctgctcctcctcc 339
| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 82 tcctgctcctgctcctcctcct---cctgctcctcctcctcctcttcctgctcctcctcc 26
Query: 340 tcctcctgctc 350
|||||||||||
Sbjct: 25 tcctcctgctc 15
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 177
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no466_o04.g1 MSMg01no466_o04.g1 CHROMAT_FILE:
MSMg01no466_o04.g1 PHD_FILE: MSMg01no466_o04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:33 2005
(446 letters)
>mm_chr14_26637935_26638780
Length = 846
Score = 816 bits (422), Expect = 0.0
Identities = 440/446 (98%)
Strand = Plus / Plus
Query: 1 tttctcacctctccctctagcccccaagcctatggcagacatcattaatcaactgtagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttctcacctctccctctagcccccaagcctatggcagacatcattaatcaactgtagaa 260
Query: 61 ctcttactctttagctcagcctgtctggaatccatctcatcattgtgcactgtgtaccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcttactctttagctcagcctgtctggaatccatctcatcattgtgcactgtgtaccat 320
Query: 121 cgatgtgctccttgactaagcaaaaggaggtgcaggaggaccctgtaccctcttctcacc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 cgatgtgctccttgactaagcaaaaggaggtgcaggaggaccctgtaccctcttttcacc 380
Query: 181 atgcattagctcccaggtagtcataattgcctacttgtgcctagagctgtgttgagtgtt 240
|||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 gtgcattagcttccaggtagtcataattgccgacttgtgcctagagctgtgttgagtgtt 440
Query: 241 ttttattcaacccacttgccaataagttcccagatgttgggcattgatctgcttcacagt 300
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttccattcaacccacttgccaataagttcccagatgttgggcattgatctgcttcacagt 500
Query: 301 tgagatatattgaggctgagaggatgttaggaatctcacagtggcagaacccaaatctaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgagatatattgaggctgagaggatgttaggaatctcacagtggcagaacccaaatctaa 560
Query: 361 cagtgaatttgtccacagcccaggctcctgataagctgttttgagaaggccggggagcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagtgaatttgtccacagcccaggctcctgataagctgttttgagaaggccggggagcct 620
Query: 421 ggtttaagcctggagatggtaggggg 446
||||||||||||||||||||||||||
Sbjct: 621 ggtttaagcctggagatggtaggggg 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
