Query= MSMg01no466_p12.b1 MSMg01no466_p12.b1 CHROMAT_FILE:
MSMg01no466_p12.b1 PHD_FILE: MSMg01no466_p12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:41 2005
(404 letters)
>mm_chr14_80542450_80543253
Length = 804
Score = 727 bits (376), Expect = 0.0
Identities = 397/404 (98%), Gaps = 1/404 (0%)
Strand = Plus / Plus
Query: 1 aaaagcaaagcaaaacaaatagaaaacattctgtaattcggcagacatgaagagatgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaagcaaagcaaaacaaatagaaaacattctgtaattcggcagacatgaagagatgcat 260
Query: 61 tagacattggattttaaaagtaatctcaccatccctggacactcaacacaagaaaaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagacattggattttaaaagtaatctcaccatccctggacactcaacacaagaaaaagga 320
Query: 121 aagagaaaagaaatcaggcttgggagagagtcttaatcattattctattgtggagagaca 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 aagagaaaagaaatcaggcttgggagagagtcttaattattattctattgtggagagaca 380
Query: 181 ccacgatcacagcaactcttacaaaagaaagcatttaattgcggcttgcttacagtttca 240
||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 ccaggatcacagaaactcttacaaaagaaagcatttaattgcgacttgcttacagtttca 440
Query: 241 gaagtttatgtctattatcagcgtggcaggacagaggcagacatggtgctgaagaaggag 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaagttta-gtctattatcagcgtggcaggacagaggcagacatggtgctgaagaaggag 499
Query: 301 ccaagggttctacggctgaatccacaggcaggggagtgtaggggaaagagaaacactagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 500 ccaagggttctacggctgaatccacaggcaggggagtgtaggggaaagagagacactaga 559
Query: 361 actggcttgagcatttgaaaccccaaagcccacacccagaggca 404
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 actggcttgagcatttgaaaccccaaagcccacacccagaggca 603
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no466_p12.g1 MSMg01no466_p12.g1 CHROMAT_FILE:
MSMg01no466_p12.g1 PHD_FILE: MSMg01no466_p12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:41 2005
(234 letters)
>mm_chr14_80727294_80727927
Length = 634
Score = 445 bits (230), Expect = e-129
Identities = 233/234 (99%)
Strand = Plus / Minus
Query: 1 aacagctctgattgcatgtactcagccttcacaaagctctgacaagagtcagtcatggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aacagctctgattgcatgtactcagccttcacaaagctctgacaagagtcagtcatggat 375
Query: 61 gaggagggaagaaacccaatgggtcccagtccccacccacccacccccactgaactactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gaggagggaagaaacccaatgggtcccagtccccacccacccacccccactgaactactg 315
Query: 121 actactaacagattctgaggggctaggagtccgtggaatcagatgttttgtccactggtg 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 314 actactaacagattctgaggggctaggagtccgtggaatcagatgttttgcccactggtg 255
Query: 181 agcccaccaggctccattgtataattccaaacacatactcacatagatgactct 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 agcccaccaggctccattgtataattccaaacacatactcacatagatgactct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
