Query= MSMg01no467_d19.b1 MSMg01no467_d19.b1 CHROMAT_FILE:
MSMg01no467_d19.b1 PHD_FILE: MSMg01no467_d19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:02 2005
(354 letters)
>mm_chr14_17538613_17539366
Length = 754
Score = 638 bits (330), Expect = 0.0
Identities = 348/354 (98%)
Strand = Plus / Plus
Query: 1 catatttaatgccttcgccatgccagggccactatggtaccacatagaccaagatgagga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catatttaatgccttcgccatgccagggccactatggtaccacatagaccaagatgaggg 260
Query: 61 ctttgcaacaaggtcttttcaatgagtgcatcattgtgccttatgcacaatgttccactt 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 ctttgcaacaaggtcttttcaatgagtgcatcattgtgcctcatgcacaatgttccactt 320
Query: 121 acaacatttataattgtcaaatacagtgagtgttaaaccttagcatttattcatgtacac 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaacatttataattgtccaatacagtgagtgttaaaccttagcatttattcatgtacac 380
Query: 181 actgagttctgaggtaaagacaaaaccatgcatgatcttgtgagttatgctttcccagac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 actgagttctgaggtaaagacaaaaccatgcatgatcttgtgagttatgctttcccaggc 440
Query: 241 ctaagttctttattgatacaatgcaggatcaaataggtattttctaggtttccttctcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaagttctttattgatacaatgcaggatcaaataggtattttctaggtttccttctcag 500
Query: 301 atttaaagttggggagaattgtgttcattgtctttttaataaaaagaaagaaga 354
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttgaagttgcggagaattgtgttcattgtctttttaataaaaagaaagaaga 554
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no467_d19.g1 MSMg01no467_d19.g1 CHROMAT_FILE:
MSMg01no467_d19.g1 PHD_FILE: MSMg01no467_d19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:02 2005
(286 letters)
>mm_chr14_17693192_17693877
Length = 686
Score = 503 bits (260), Expect = e-147
Identities = 278/288 (96%), Gaps = 8/288 (2%)
Strand = Plus / Minus
Query: 1 ttcttttgaaggatagcaattggctgcacaggaataagatatacgcaaaacatcctcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ttcttttgaaggatagcaattggctgcacaggaataagatatacgcaaaacatcctcttt 297
Query: 61 actggagatctaattggtgatcacatccacagggctgcagccaggccactaaagagataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 actggagatctaattggtgatcacatccacagggctgcagccaggccactaaagagataa 237
Query: 121 aggcagggcagaagaaccaattaaaaaggctttgtttcattgggaagagaggccccttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 aggcagggcagaagaaccaattaaaaaggctttgtttcattgggaagagaggccccttgg 177
Query: 181 tctagcaaactttatatgccccagtacaggggaatgccagggtgaaaaggtgggagcgag 240
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 176 tctagcaaactttatatgccccagtacaggggaatgccagggtgtaaaggtgggagtgag 117
Query: 241 acagtatttt----agcacagcatggggagggcctaggggacttttgg 284
|||||| ||||||||||||||||||||||||||||||||||
Sbjct: 116 acagta----ggggagcacagcatggggagggcctaggggacttttgg 73
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
