Query= MSMg01no467_i02.b1 MSMg01no467_i02.b1 CHROMAT_FILE:
MSMg01no467_i02.b1 PHD_FILE: MSMg01no467_i02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:24 2005
(360 letters)
>mm_chr14_119405326_119406086
Length = 761
Score = 596 bits (308), Expect = e-175
Identities = 341/354 (96%), Gaps = 5/354 (1%)
Strand = Plus / Plus
Query: 5 gaattcactttat---cccacggacacttaagtattcctgcattagaaattctgtacact 61
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactttatata--cacgaacacttaagtattcctgcattagaaattctgtacact 262
Query: 62 tgtcaaatattttcatgattactgatgacaaatgtcctgaaatgagctaataattctata 121
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 263 tgtcaaatattttcatgattactgatgacaaatatcctgaaatgagctaataattctata 322
Query: 122 catacagatttggaaatgaaggtggcttttcattatctccagctaaatttagagcctttc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 catacagatttggaaatgaaggtggcttttcattatctccagctaaatttagagcctttc 382
Query: 182 ctaagtaagtcatggacagatggaaacttgatggtttcactgttgatggtggacgcagga 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctaagtaagtcatggacagatggaaacttgatggtttcactgttgatggtggacgcagga 442
Query: 242 gagaagggccacactcaccactcaccgctaaccttcccagcaagtcagcagctagaggaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gagaagggccacactcaccactcaccgctaaccttcccagcaagtcagcagctagaggaa 502
Query: 302 aacccgtgcgtgcccgcgcaggtgcgcgggacccgtgcgtgcccgcgcaggtgc 355
||||||||| | ||||||||||||||||| |||||||| | ||| |||||||||
Sbjct: 503 aacccgtgcatacccgcgcaggtgcgcggaacccgtgcatacccacgcaggtgc 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 761
Length adjustment: 9
Effective length of query: 351
Effective length of database: 752
Effective search space: 263952
Effective search space used: 263952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no467_i02.g1 MSMg01no467_i02.g1 CHROMAT_FILE:
MSMg01no467_i02.g1 PHD_FILE: MSMg01no467_i02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:24 2005
(422 letters)
>mm_chr14_119624611_119625437
Length = 827
Score = 752 bits (389), Expect = 0.0
Identities = 416/427 (97%), Gaps = 5/427 (1%)
Strand = Plus / Minus
Query: 1 aagaacagcctgtatcccatcaaacaaacaaaac----aaaaaaaatgaaaaccaaaaaa 56
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 627 aagaacagcctgtatcccatcaaacaaacaaaacaaaaaaaaaaaatgaaaaccaaaaaa 568
Query: 57 caagcacattaaaagtattcttcataccatggatgtaggaaccgtacattctaggtcctc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 caagcacattaaaagtattcttcataccatggatgtaggaaccgtacattctaggtcctc 508
Query: 117 acagagcacagacaacatgaagcacagagtctgtagattgcaaatatggagtgtgtgact 176
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 507 acagcgcacagacaacatgaagcacagagcctgtagattgcaaatatggagtgtgtgact 448
Query: 177 agg-aaaaaaaaattaaagaggaccaaatgatgtgtcgaaggcaaaatggtaccactagg 235
||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 447 aggaaaaaaaaaattaaagaggaccaaatgatgtgtccaaggcaaaatggtaccactagg 388
Query: 236 accttcaatgcaaagtagaaacattggtactatttgggacaatggagaggatggggaatt 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 accttcaatgcaaagtagaaacattggtactatttgggacaatggagaggatggggaatt 328
Query: 296 tggtcactggtcagtttgctgctgttctcacagagcacagaagtaacaataaccttcaga 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tggtcactggtcagtttgctgctgttctcacagagcacagaagtaacaataaccttcaga 268
Query: 356 aatatgtcatcttgctgctagcatctacagcatgtgctctaataaaagcacagtcctagc 415
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||
Sbjct: 267 aatatgtcatcttgctgctagcatctacaggacgtgctctaataaaagcacagtcccagc 208
Query: 416 tctttat 422
|||||||
Sbjct: 207 tctttat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 827
Length adjustment: 9
Effective length of query: 413
Effective length of database: 818
Effective search space: 337834
Effective search space used: 337834
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
