AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCTTTCCTTTTCATGTGGATGCTGCGTGCTCCTTAAATGTTTATGAGAT
AAATTCATTTTTATCAACAGAATATAGATTTGTTGTTAAGAAGTTGATAG
AATATTTTAAGTGGATTAAAGCAGTTGAGAGAGTTAGACCTAAAAGTACC
CCCCCAATAATTGAAAAGATAAAAGAAATATTTAAGCAGACAGCCACTTC
ACACTGGGGTTTAAATTCAAAGATGCTCATTACCTCTGAATCCTTTAGAA
AGTACCAGTGTTGTGTGAGAGAGGCAATTAGCACAATCTTTTATCTTTGG
AGCAATGTTCTAATTCTTCTGTAGCCTCTTTCCACTGCACTGAGCATACT
GGGTAACAATAAGGAAAAGGGGGGAATATTTTGCTTGTAACTGCTTTGGT
ATCCATGGAAAAAAGCGCTTATGAATGCAACCTACAGTGAAAGGAAAAGG
GCTCAGGGAAGTTTAGGTAACTATGAGAATAATGAAATGGGCTGAGGGAA
GAGCTAGGTCACATGTCAGCTTCTCCTATAACAAATACCATGCTCTGAGT
GCTACCTGCCTGGGAAGCTTGTCCTATGACAGACTATTTATCAGTGGGTC
TCTACAGGGCTGTGACCTGCAGAAGACAACTTAAGAGAATGATTCTGCGG
TAATATTTGAGTCTAGGGATGATAGATAATTGATGTGTGATACTCAGGAT
AAATGAAATTATATAGACCGT

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAGACTTTGACCATGAAG
GGATATTGAATTTTGTCAATTTTTCCCCAGCATCTACTGCAATGATCATG
TGTTTTTTTTTCTTTGAGTTTGTTTATGTAGAGGATTACATTGATGGATT
TCCATATATTGAAAGTTCCTTGCATACTTAGGATGAAGCCTACTTGATTG
TGGTGAATGATCATTTTGATGTGTTCTTGAATTCTGTTGGCAAGAATTTT
ATTTAGTATCTTTGCATCTATTTTCACAAGGGAAATTGGTCTGAAGTTCT
CTTTATTTGTTGAGTCTTTGTGTGGTTTAGGTATTAAAGTAACTGTGTCT
TCATAGAATGAATTGGGTAGAGGTCCTTCTGTTTCTATTTTGTGGAACAG
TTTGAAGAGTATTGGCATTAGGTTTTCTTTAAAGGTCTGATAGAATTCTG
CATTAAAACCTTCTGTTCCTGGGCTTTTTTGCTTGGGAGTCTTTTAATGA
CTGCTTCTATTACTTCACCCTTATGGCACTGTTTACACGGTTTATCCGAT
CTCGATATACCTCTGCCACTATGTCTTTTGTCCTACAAATTGTCCTCCAC
CTCCCCGATTTTTTTGTTTTTGCTGATCAACCCGATCCTTTCTATCTCCG
TTTTTACCCTCTTTTTTCCCCCCCCTCTCTTTCTATTTTTTCTTCTTTCC
CCCTTTTTCCTCCTTACTCCTTTCACTTTTATCTTTCACCTCCCCG

Query= MSMg01no469_g19.b1 MSMg01no469_g19.b1 CHROMAT_FILE:
MSMg01no469_g19.b1 PHD_FILE: MSMg01no469_g19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:00 2005
         (660 letters)



>mm_chr14_39213804_39214865
          Length = 1062

 Score =  988 bits (511), Expect = 0.0
 Identities = 596/661 (90%), Gaps = 61/661 (9%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccttt--ccttttcatgtggatgctgcgtgctccttaaatgtttatgagataaat 62
           ||||||||||  |||||  ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 620 gaattcctttccccttt--atgtggatgctccgtgctccttaaatgtttatgagataaat 563

                                                                       
Query: 63  tcatttttatcaacagaatatagatttgttgttaagaagttgatagaatattttaagtgg 122
           ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 562 tcatttttatcaacagactatagatttgttgtt-agaagttgatagaatattttaagtgg 504

                                                                       
Query: 123 attaaagcagttgagagagttagacctaaaagtaccccccc---aataattgaaaagata 179
           |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||
Sbjct: 503 attaaagcagttgagagagttagacctaaaagtacccccccccaaataattgaaaagata 444

                                                                       
Query: 180 aaagaaatatttaagcagacagccacttcacactggggtttaaattcaaagatgctcatt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaagaaatatttaagcagacagccacttcacactggggtttaaattcaaagatgctcatt 384

                                                                       
Query: 240 acctctgaatcctttagaaagtaccagtgttgtgtgagagaggcaattagcacaatcttt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 acctctgaatcctttagaaagtaccagtgttgtgtgagagaggcaattagcacaatcttt 324

                                                                       
Query: 300 tatctttggagcaatgttctaattcttctgtagcctctttccactgcactgagcatactg 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tatctttggagcaatgttctaattcttctgtagcctctttccactgcactgagcatactg 264

                                                                       
Query: 360 ggtaacaataaggaaaaggggggaatattttgcttgtaactgctttggtatccatggaaa 419
           |||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct: 263 ggtaacaaaaaggaaaaggggggaatattttgcttgtaactgctttggtatccat----- 209

                                                                       
Query: 420 aaagcgcttatgaatgcaacctacagtgaaaggaaaagggctcagggaagtttaggtaac 479
                                                        |||||   |||||||
Sbjct: 208 ---------------------------------------------ggaag---aggtaac 197

                                                                       
Query: 480 tatgagaataatgaaatgggctgagggaagagctaggtcacatgtcagcttctcctataa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tatgagaataatgaaatgggctgagggaagagctaggtcacatgtcagcttctcctataa 137

                                                                       
Query: 540 caaataccatgctctgagtgctacctgcctgggaagcttgtcctatgacagactatttat 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 caaataccatgctctgagtgctacctgcctgggaagcttgtcctatgacagactatttat 77

                                                                       
Query: 600 cagtgggtctctacagggctgtgacctgcagaagacaacttaagagaatgattctgcggt 659
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 76  cagtgggtctctacagggctgtgacctgcagaagaaaacttaagagaatgattctgcggt 17

            
Query: 660 a 660
           |
Sbjct: 16  a 16


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1062
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1052
Effective search space:   683800
Effective search space used:   683800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)