Query= MSMg01no469_j07.b1 MSMg01no469_j07.b1 CHROMAT_FILE:
MSMg01no469_j07.b1 PHD_FILE: MSMg01no469_j07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:13 2005
(484 letters)
>mm_chr14_103802797_103803681
Length = 885
Score = 901 bits (466), Expect = 0.0
Identities = 481/486 (98%), Gaps = 3/486 (0%)
Strand = Plus / Plus
Query: 1 tgtctggctagagagcgcctttctccactttgtagctcagatgattggtag-gcatcccc 59
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 201 tgtctggctagagagcgcctttctccactttgtagctcagatgattggt-gtgcatcccc 259
Query: 60 aaccccagcattttgcttagtgcttaagatcagaactcaggtcttcccgattatagggca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaccccagcattttgcttagtgcttaagatcagaactcaggtcttcccgattatagggca 319
Query: 120 agccactttactaactgccgtctccctagcaccctgattattttttaagttatgaatctt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agccactttactaactgccgtctccctagcaccctgattattttttaagttatgaatctt 379
Query: 180 ttctgtgatttttttt-acatgctaattctaaagctctcgcaggactacaaataaaaaag 238
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttctgtgatttttttttacatgctaattctaaagctctcgcaggactacaaataaaaaag 439
Query: 239 caagaagaagatcatatctagaaaaagcattgtctaattttcagcttttgttgttgtata 298
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 440 caagaagaagatcaaatctagaaaaagcattgtctacttttcagcttttgttgttgtata 499
Query: 299 acgagtgttcatttgttgctttgctcattggtttctgacaattaaaacatggctactgac 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 acgagtgttcatttgttgctttgctcattggtttctgacaattaaaacatggctactgac 559
Query: 359 ttgacaaaatttaacccaaggaattttaatgctagagtcccctaatagggaacaaaaggt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttgacaaaatttaacccaaggaattttaatgctagagtcccctaatagggaacaaaaggt 619
Query: 419 ttgtaaatgatgtatctacttgcttgtgtgtaggtgagatttaaattgacacaaatcttg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttgtaaatgatgtatctacttgcttgtgtgtaggtgagatttaaattgacacaaatcttg 679
Query: 479 atggaa 484
||||||
Sbjct: 680 atggaa 685
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 885
Length adjustment: 10
Effective length of query: 474
Effective length of database: 875
Effective search space: 414750
Effective search space used: 414750
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no469_j07.g1 MSMg01no469_j07.g1 CHROMAT_FILE:
MSMg01no469_j07.g1 PHD_FILE: MSMg01no469_j07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:13 2005
(414 letters)
>mm_chr14_103968159_103968972
Length = 814
Score = 731 bits (378), Expect = 0.0
Identities = 405/414 (97%)
Strand = Plus / Minus
Query: 1 ctcttagaccatgggctcagcttcctccccaggcatgaagcctggggtagggtgctccct 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 614 ctcttagaccatgggctcagcttcttccccaggcatgaagcctggggtagggtgctccct 555
Query: 61 gagagcttcctctattgcttcctcccgtgtgctcttcacagtatgccttcccccagattc 120
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 554 gagagcttcctctattgcttcctcctgtgtgctctccacagtatgccttcccccagattc 495
Query: 121 tctttcctccttcctttcctctctgtcttccacattcactggttccatccacacatcttg 180
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 494 tctttcctccttcctttcctctctgtcttccttattcactggttccatccacacatcttg 435
Query: 181 gctctctctccttgatgctgtaagtcatatgtgtctccagatttctttaacgttcttctt 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gctctctctccttgatgctataagtcatatgtgtctccagatttctttaacgttcttctt 375
Query: 241 gagtcatctcttgggttgaccaggagaccagtatttacatcctcaagtttctaaggctac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gagtcatctcttgggttgaccaggagaccagtatttacatcctcaagtttctaaggctac 315
Query: 301 aacatctaccttgccatctaaaaaaattcacagctcattggtgacctgagtgaatttctg 360
||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||
Sbjct: 314 aacatctaccttgccatctaaaagactccacagctcattggtgacctgagtgaatttctg 255
Query: 361 cagctcatgttgatacaattgccccataggtaaaataataagaataataatgtt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 cagctcatgttgatacaattgccccataggtaaaataataagaataataatgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
