Query= MSMg01no470_f22.b1 MSMg01no470_f22.b1 CHROMAT_FILE:
MSMg01no470_f22.b1 PHD_FILE: MSMg01no470_f22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:15 2005
(249 letters)
>mm_chr14_115695274_115695922
Length = 649
Score = 429 bits (222), Expect = e-125
Identities = 240/246 (97%)
Strand = Plus / Plus
Query: 4 ctttgaagtttgtccacaacagactgagtagttacagtgtactttgtttttccatctgtc 63
|||||| ||||||||||||||||| | |||||||||||| |||||| |||||||||||||
Sbjct: 204 ctttgaggtttgtccacaacagaccgggtagttacagtgcactttgcttttccatctgtc 263
Query: 64 ttatgctcagtagcgtgtatttatacatgtgccttaatgtaagcacaaatgtgtacactt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttatgctcagtagcgtgtatttatacatgtgccttaatgtaagcacaaatgtgtacactt 323
Query: 124 aattttctcagttttcacatatggctaccaaatctatcattgagccccatatgacctact 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aattttctcagttttcacatatggctaccaaatctatcattgagccccatatgacctact 383
Query: 184 tacagaggtctcagtcattgagttaatgttatgaatgctgttgttggaagaactaacgga 243
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 384 tacagaggtctcagtcattgagttaatgttgtgaatgctgttgttggaagaactaacgga 443
Query: 244 aaggtc 249
||||||
Sbjct: 444 aaggtc 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no470_f22.g1 MSMg01no470_f22.g1 CHROMAT_FILE:
MSMg01no470_f22.g1 PHD_FILE: MSMg01no470_f22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:15 2005
(483 letters)
>mm_chr14_115905932_115906814
Length = 883
Score = 835 bits (432), Expect = 0.0
Identities = 471/484 (97%), Gaps = 2/484 (0%)
Strand = Plus / Minus
Query: 1 acagtctttgctgaatataaaatcttcattgaatatgcaatcgtcattgaatagtgtcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 acagtctttgctgaatataaaatcttcattgaatatgcaatcgtcattgaatagtgtcca 624
Query: 61 ctaactatacagtccttgctgaatagaaagtcttacctgaatgtactatcttcacaagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ctaactatacagtccttgctgaatagaaagtcttacctgaatgtactatcttcacaagat 564
Query: 121 gtacagtctgctgggtgtgtattcgtt-actgtatatacaacatgactagatgtacaatc 179
|||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||
Sbjct: 563 gtacagtctgctgggtgtgtattc-ttcactgtatatactacatgactagatgtacaatc 505
Query: 180 tttgctgcatgtgcagtgttcactggagtcagtctgctatggatatacactgcaaactag 239
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 504 tttgctgcatgtgcagtgttcactggagtcagtctgctatggatgtacactgcaaactag 445
Query: 240 acatgtaacctactctggacatacagtgttcactggatgttcagtcctcactgagtgtac 299
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acatgtaacctacactggacatacagtgttcactggatgttcagtcctcactgagtgtac 385
Query: 300 tcttatcactgaacttagtcttcccttaatgaagtatcttcacagaatttacaaccctca 359
|||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 384 tcttgtcaccgaacttagtcttcccttaatgaagtatcttcacagaatttacaactctca 325
Query: 360 ctaaaagtacagtcctcactgaacatactgcccttgttgaatgtccagtcttagctgaat 419
|||||||||||||||||||||||||||||| |||| |||||||| |||| ||||||||||
Sbjct: 324 ctaaaagtacagtcctcactgaacatactgtccttattgaatgtacagttttagctgaat 265
Query: 420 gtcctttcctcactgaatgtacagtttttgctatatgtatagccctcactaaatgtaaag 479
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 264 gtcctttcctcactgaatgtacagtttttgctatatgtatagccctcagtaaatgtaaag 205
Query: 480 tatt 483
||||
Sbjct: 204 tatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space: 412929
Effective search space used: 412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
