Query= MSMg01no471_e17.b1 MSMg01no471_e17.b1 CHROMAT_FILE:
MSMg01no471_e17.b1 PHD_FILE: MSMg01no471_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:30 2005
(576 letters)
>mm_chr14_10514867_10515842
Length = 976
Score = 1036 bits (536), Expect = 0.0
Identities = 561/576 (97%), Gaps = 13/576 (2%)
Strand = Plus / Plus
Query: 5 gaattctctgaa----tacctgccttttccatccttaaaatcacatagcatgttgccttg 60
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gaattctctgaaaagtt---tgccttttccatccttaaaatcacatagcatgttgccttg 266
Query: 61 ttagataacacttgggtcatggagatagcttatatgataaagtgcttaccttgtaagcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 267 ttagataacacttgggtcatggagatagcttatatgataaagtgcttaccttgcaagcaa 326
Query: 121 agggacatcagttccatcctcagagaccattatacacacacacacacacacacacacaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 agggacatcagttccatcctcagagaccattatacacacacacacacacacacacaca-- 384
Query: 181 cacattaacaaaagaaaatatgcatttaactctcccctatgttctttcatgggttaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ----ttaacaaaagaaaatatgcatttaactctcccctatgttctttcatgggttaatat 440
Query: 241 ttcatttcttgtgagtcttaagtaatattccattattttgatgaatcaaagcttattttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcatttcttgtgagtcttaagtaatattccattattttgatgaatcaaagcttattttc 500
Query: 301 cattcatcttctcaggatatcttgttttcttccaactttggtacacatgcacgagactgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cattcatcttctcaggatatcttgttttcttccaactttggtacacatgcacgagactgc 560
Query: 361 tgtaggttttgcagacttaggtctgtggttcctttggttaaatccccaagaatccagctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtaggttttgcagacttaggtctgtggttcctttggttaaatccccaagaatccagctg 620
Query: 421 ttgggtcacctgctgtggagccttgtaccactttctgtttccacctgcaatggatgagtg 480
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 ttgggtcacctgctgtggagccttgtaccactttctgtttccacctacaatggatgagtg 680
Query: 481 tcactgttcatctcatggtggttagcacacctgtgcacttgtgctgttgctattctggct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcactgttcatctcatggtggttagcacacctgtgcacttgtgctgttgctattctggct 740
Query: 541 tgggactgtgatagtaagtgcacagcaataccaacc 576
||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgggactgtgatagtaagtgcacagcaataccaacc 776
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_e17.g1 MSMg01no471_e17.g1 CHROMAT_FILE:
MSMg01no471_e17.g1 PHD_FILE: MSMg01no471_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:30 2005
(575 letters)
>mm_chr14_10647097_10648070
Length = 974
Score = 1027 bits (531), Expect = 0.0
Identities = 564/575 (98%), Gaps = 1/575 (0%)
Strand = Plus / Minus
Query: 1 tccccccaaaatatttatacttcttagaagacataacagtgctgtgaagcattacttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 tccccccaaaatatttatacttcttagaagacataacagtgctgtgaagcattacttctt 715
Query: 61 gagccctgattttgagaagtactaaaagtaacagtaaggttttagatgtcttgcccacat 120
|||||||||||| |||||||||||||||||||||||| ||||||||| || |||||||||
Sbjct: 714 gagccctgatttagagaagtactaaaagtaacagtaaagttttagatatcatgcccacat 655
Query: 121 tttggtcaggggatgacaattacagaacttgtgagaagcaagcaatgtggaatgagaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tttggtcaggggatgacaattacagaacttgtgagaagcaagcaatgtggaatgagaaga 595
Query: 181 aaacccagatcttgcctggttactacaatcagggagagtagactatagtgagagagtagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 aaacccagatcttgcctggttactacaatcagggagagtagactatagtgagagagtagg 535
Query: 241 aaactaatctcaaggactcttaagccattctactggtgtgttctatttaaaaggatatat 300
||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 534 aaactaatctcaaggactcttaagccattctactggtgtgttctagataaaaggacatat 475
Query: 301 ttgtgctttaagatcatatttcatagaaaatttttctggctcagaataattaaaggagtc 360
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 474 ttgtgctttaagatcatattgcatagaaaaattttctggctcagaataattaaaggagtc 415
Query: 361 tcctttaggtctcacaacataattgacatacaacaaattgattggatgttgtgtaagtaa 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 414 tcctttaggtctcacaacataattgacatacaacaaattga-tggatgttgtgtaagtaa 356
Query: 421 aaatacatgaagatttgcaggtggggagaacatatgcaaaggccctgtggtagagaagag 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 aaacacatgaagatttgcaggtggggagaacatatgcaaaggccctgtggtagagaagag 296
Query: 481 tcatggaaaatgtacatgagactagagaagaccaaaggcatggggtgagattgtgaaggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tcatggaaaatgtacatgagactagagaagaccaaaggcatggggtgagattgtgaaggt 236
Query: 541 aactgagacaacaaatgccttctggatcatgttta 575
|||||||||||||||||||||||||||||||||||
Sbjct: 235 aactgagacaacaaatgccttctggatcatgttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 974
Length adjustment: 10
Effective length of query: 565
Effective length of database: 964
Effective search space: 544660
Effective search space used: 544660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
