NNAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCATTGTTTTTCCCTGGGATCAAAAAGAGCTCCACCTAAGGTC
CACTTAATCTTAGAAGCCAGGGTCAAGGGCTTCATGCCCTTGCCATAGTT
CCTATTTTAGTCTATTGTATAGTCCACCTCCCCACTAGGCCATTGTAAAT
ACGTGTGTATGGGTGTAACTCAGCTATCTATAGTTCTAAGTATCTAGTCT
GGTTCCTCCTTAGGTCTCAAATTTCCTCCTTCCTAGACAATGGTAAATTC
CTGTGTAGGGCAGTGACTTAGCTTTTATTCAAAGTGATAGTGTAATACCA
GAGGCAATTCTGAATGTCACTGAATAGGCAACATTCTTACTGAATTCCAA
GTGCTCAAGGACTTTCTAGGACGTTGGAACATTGGTGAAGGCTTAGCTAT
GTCAGAATTCAATCTTAAAAGACACTTATAGTAAGATAATACTAAAAGAG
AGCACGTGGATCCATACACCAGACTAACATAGGAATAGAATGAGTATATG
GGTTAAAGAGAACGGCAGACTCCAGGAGGTGAGTTTCCGTGAAACTCTCT
GCCCCATGAGTGGCTTCCAGGCCTCTCGGCCTGTCAAGCTGACTCGACTG
GAGTGCGTGGCATCAGAGTACCATCAAACTCACTATATACCCGAGGATGA
CATTCAACTTCTCAACCCCTTGCCTCCATCTTTTGGGTGCTAGGATCATA
GGTACN

NNNCCGAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCACTAAAGACAGACATGT
GGCTTTTGGTCCACAGATACAGAGTTGTAAACATCGGATAGGAAAGTTCA
AGGCATATTTTAGTTCAAAAAGGACAAACAAGTTCTTTTTCATAGCACCA
GACCTGCCTGGGTTTAATAAACACCTTCAGGAGCTTATGAATCACATACC
CCCAAGGTATATCTGCAGTAGCCAGGAAAATATGAGAATCTCTTCCGGAC
AGTGAAGGCGGGCTTTCTGTTGTGCTCCTTGGCTTTTCCTCCAGTTAAAG
CTCTGCATGTAGTAAGAAGCTGATTTGGATTTTGTTTGTTTGGAGTTTGT
CTATTTTTATTTTCAGCTTAAGGACACAAGCATTTGTCCAGTATGTACAG
CAGTGTCCTGCTGGGCAGCACTGACAACACGTTTTTTTCCTAAAGGTCAA
ATGGGAGATTTTCAATATTTGTGTGTGTGTGTGTGAGTTTGTGTGCAAAC
ATCTGTGTGTGTATGTGAGTGTCTGTGTGTATGCATATGTGTCTGTCTGT
ATGTTTATGTGTTTGTGTTGTTTGTATGATGNANGNNNGAAGGNGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNN

Query= MSMg01no471_e22.g1 MSMg01no471_e22.g1 CHROMAT_FILE:
MSMg01no471_e22.g1 PHD_FILE: MSMg01no471_e22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:31 2005
         (508 letters)



>mm_chr14_36281703_36282610
          Length = 908

 Score =  764 bits (395), Expect = 0.0
 Identities = 483/535 (90%), Gaps = 38/535 (7%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctcactaaagacagacatgtggcttttggtccacagatacagagttgtaaacatcggata 60
           |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 201 ctcactaaagacagacatgtggatttcggtccacagatacagagttgtaaacatcggata 260

                                                                       
Query: 61  ggaaagttcaaggcatattttagttcaaaaaggacaaacaagttctttttcatagcacca 120
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 ggaaagttcaaggcatattttagttcaaaaaggagaaacaagttctttttcatagcacca 320

                                                                       
Query: 121 gacctgcctgggtttaataaacaccttcaggagcttatgaatcacatacccccaaggtat 180
           ||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 321 gacctgcctggatttaataaacaccttcaggagcctatgaatcacatatccccaaggtat 380

                                                                       
Query: 181 atctgcagtagccaggaaaatatgagaatctcttccggacagtgaaggcgggctttctgt 240
           |||||||||||||||||||| |||||| ||||||  || |||||||||||||||| ||||
Sbjct: 381 atctgcagtagccaggaaaacatgagactctcttatggtcagtgaaggcgggcttcctgt 440

                                                                       
Query: 241 tgtgctccttggcttttcctccagttaaagctctgcatgtagtaagaagctgatttggat 300
           |||| ||||||||||||||||||||||||||||||||||       ||||||||||||||
Sbjct: 441 tgtgttccttggcttttcctccagttaaagctctgcatg-------aagctgatttggat 493

                                                                       
Query: 301 tttgtttgtttggagtttgtctatttttattttcagcttaaggacacaagcatttgtcca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 494 tttgtttgtttggagtttgtctatttttattttcagcttaaggacacaagcttttgtcca 553

                                                                       
Query: 361 gtatgtacagcagtgtcctgctgggcagcactgacaacacgttttttt-cctaaaggtca 419
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 554 gtatgtacagcagtgtcctgctgggcagcactgacaacacgttttttttcctaaaggtca 613

                                                                       
Query: 420 aatgggagattttcaatatttgtgtgtgtgtgtgtg------------------------ 455
           ||||||||||||||||||||||||||||||||||||                        
Sbjct: 614 aatgggagattttcaatatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 673

                                                                  
Query: 456 --agtttgtgtgcaaacatctgtgtgtgtatgtgagtgtctgtgtgtatgcatat 508
             ||||||||||||||||||||||||||||||||    |||||||||||||||||
Sbjct: 674 tgagtttgtgtgcaaacatctgtgtgtgtatgtg----tctgtgtgtatgcatat 724


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space:   447204
Effective search space used:   447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)