Query= MSMg01no471_j09.b1 MSMg01no471_j09.b1 CHROMAT_FILE:
MSMg01no471_j09.b1 PHD_FILE: MSMg01no471_j09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:53 2005
(648 letters)
>mm_chr14_73607392_73608440
Length = 1049
Score = 1116 bits (577), Expect = 0.0
Identities = 620/635 (97%), Gaps = 3/635 (0%)
Strand = Plus / Minus
Query: 16 tgtgtgtgaacacttactgtttagtaattcaaaattagcttttttacttttcagtcgata 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 tgtgtgtgaacacttactgtttagtaattcaaaattagcttttttacttttcagtcgata 790
Query: 76 ttggcatctgcataacttgaggaacttagtgtcatcttagttcttttagtggtgcataat 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 ttggcatctgcataacttgaggaacttagtgtcatcttagttcttttagtggtgcataat 730
Query: 136 tttcataatattctcatataatcctcttatttcagtaagactggtaatgttcccaacaag 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tttcataatattctcatataatcctcttatttcagtaagactggtaatgttcccaacaag 670
Query: 196 aatgatattttaaacaaaaacataattataacttaacatgtatttggatgtattttctgc 255
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 669 aatgatattttaaacaaaaacataattataacttaacatgtatttggatgtataagctgc 610
Query: 256 agtacactgtgtttttaaatagatagctattattttatgttcctgccactttctataaaa 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 agtacactgtgtttttaaatagatagctattattttatgttcctgccactttctataaaa 550
Query: 316 gggaaacccagattcctagaga--ttttttttttgcaattccgagttttatgagtgatac 373
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 549 gggaaacccagattcctagagattttttttttttgcaattccgagttttatgagtgaaac 490
Query: 374 gtgaagatattaaagtagaagaaaactatcagttggtctgtcatcatcagtggcgctcgg 433
||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 489 gtgaagatattaaagtagaagaagactatcagttggtctgtcgtcatcagtggcgctcgg 430
Query: 434 tgggaagctcagtcatcagacactgagcaggggtggggaatagaaacctttgctcagagc 493
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 429 tgggaagctcagtcatcacacactgagcaggggtgggg-atagaaacctttgctcagagc 371
Query: 494 agatggaaaaaaaaatgttacagaaatgaccaacacttgaactagaccaaaaaagccatt 553
|||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 370 agatggaagcaaaaatggtacagaaatgaccaacacttgaactagaccaaaaaagccgtt 311
Query: 554 ttaaaaattgatatttaaggccccagggaatcattttcaaatcttagttttacattttaa 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ttaaaaattgatatttaaggccccagggaatcattttcaaatcttagttttacattttaa 251
Query: 614 atgttgttttattgaaagatatcatatagaaaatc 648
||||||||||||||||||||| |||||||||||||
Sbjct: 250 atgttgttttattgaaagataccatatagaaaatc 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1049
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1039
Effective search space: 662882
Effective search space used: 662882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_j09.g1 MSMg01no471_j09.g1 CHROMAT_FILE:
MSMg01no471_j09.g1 PHD_FILE: MSMg01no471_j09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:53 2005
(195 letters)
>mm_chr14_73444166_73444760
Length = 595
Score = 364 bits (188), Expect = e-105
Identities = 191/192 (99%)
Strand = Plus / Plus
Query: 1 atctacactgcgtctcacttcccaaatgctctgactcccgaggcgaaaggcagaggatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctacactgcgtctcacttcccaaatgctctgactcccgaggcgaaaggcagaggatca 260
Query: 61 aaaaatgctatttgagagaatgttgtagtacacagattagttgactgcttaaactggaat 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaatgctatctgagagaatgttgtagtacacagattagttgactgcttaaactggaat 320
Query: 121 gggaagagggccagtgaagatgaggaggaagagcaggggagagggggataggaaggggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggaagagggccagtgaagatgaggaggaagagcaggggagagggggataggaaggggaa 380
Query: 181 gggaagggagaa 192
||||||||||||
Sbjct: 381 gggaagggagaa 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 595
Length adjustment: 8
Effective length of query: 187
Effective length of database: 587
Effective search space: 109769
Effective search space used: 109769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
