Query= MSMg01no472_l06.b1 MSMg01no472_l06.b1 CHROMAT_FILE:
MSMg01no472_l06.b1 PHD_FILE: MSMg01no472_l06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:25 2005
(521 letters)
>mm_chr14_30815794_30816714
Length = 921
Score = 845 bits (437), Expect = 0.0
Identities = 503/531 (94%), Gaps = 11/531 (2%)
Strand = Plus / Plus
Query: 1 ttcatacccaaacctcatatccccggcttacatatgaagcaagcatcagacaatttcaga 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 192 ttcatacccaaacctcatatccccggcttacatacgaagcaagcatcagacaatttcaga 251
Query: 61 atggaaacaagctaggtaagtttgacagagtcatgaaaaagcgaggccagaggctggggt 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 252 atggaaacaagctaggtaagtttgacaaagtcatgaaaaagcgaggccagaggctggggt 311
Query: 121 ggcagaatgactgagtgcctctggcccaggaggaaattgtaatgggaaaggagctgaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ggcagaatgactgagtgcctctggcccaggaggaaattgtaatgggaaaggagctgaaat 371
Query: 181 ccagagagcctggtgtttagctgctggaaatacaccggatgttacttctgtgttttcacg 240
|| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 372 ccggagagcctggtgtttagctgctggaaatacaccggacgttacttctgtgttttcacg 431
Query: 241 agtgtattttgtaaaacaagatgccaatgaccagcggagcagaaactgagagcttcatgg 300
|||| | || |||||||||||||||||||||||||| ||| ||| ||||||| |||||
Sbjct: 432 agtgcaccctg-aaaacaagatgccaatgaccagcggaacaggaacagagagctgcatgg 490
Query: 301 aaacgtgctactcttgcaggttttcaaaaaccatctccaaataaagctcactttaagggg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 491 aaacgtgctactcttgcaggttttcaaaaaccatctccaaataaagctcactttaaagcg 550
Query: 361 ggggggcattatccct----------acacacacacagagataccacaataaacagtgag 410
||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 551 ggggggcattatccccccccccccacacacacacacagagataccacaataaacagtgag 610
Query: 411 ctttggggccatcaggaagctaacaagtaaagccaccctgaatggctcaaggcaccaact 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ctttggggccatcaggaagctaacaagtaaagccaccctgaatggctcaaggcaccaact 670
Query: 471 acaaagggccagagttgaagcttccccattgctatgtgcactgcccagggc 521
|| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 acgaaggaccagagttgaagcttccccattgctatgtgcactgcccagggc 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_l06.g1 MSMg01no472_l06.g1 CHROMAT_FILE:
MSMg01no472_l06.g1 PHD_FILE: MSMg01no472_l06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:25 2005
(518 letters)
>mm_chr14_30976663_30977580
Length = 918
Score = 963 bits (498), Expect = 0.0
Identities = 513/518 (99%)
Strand = Plus / Minus
Query: 1 attacagtgattttatgcacagactcagctcttctcaaagctggtgataccttaatagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 attacagtgattttatgcacagactcagctcttctcaaagctggtgataccttaatagtt 659
Query: 61 gaaattaaagccataattttcatgcgttcctcatcctgctggtggccatcactgttgcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gaaattaaagccataattttcatgcgttcctcatcctgctggtggccatcactgttgcct 599
Query: 121 acaatgaaaagaatgtttatgagtttaataactcgacttcttgtaagaaacgtattaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 598 acaatgaaaagaatgtttatgagtttaataactcgacttcttgtaagaaacatattaatg 539
Query: 181 acagtctctaagatgttactgccatcttctgccagatcttttccttctgctcagtgttct 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 538 acagtctctaagatgttactgccatcttctgccagatcctttccttctgctcagtgttct 479
Query: 241 tatataggctagtaagattgcttccatgcctcaggtatcggctctgtaaggcagcttggt 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 478 tatataggctagtaagattgcttccatgcctcaggtatcggctctgtagggcagcttggt 419
Query: 301 atctatacaaagatagcatgtctaccatatgtgcaacttcttgttacagttcagtacctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 atctatacaaagatagcatgtctaccatatgtgcaacttcttgttacagttcagtacctg 359
Query: 361 cttcttcttggggttttgattttatttcggcatcttgcccgtgtgagacagcgtgcgtag 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 358 cttcttcttggggttttgattttatttcggcaccttgcccgtgtgagacagcgtgcgtag 299
Query: 421 ggcccagcacacaaggcagaatgttgagagggtctgggtaagttatttgccctaaacgcc 480
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ggcccagcacacaaggcagaacgttgagagggtctgggtaagttatttgccctaaacgcc 239
Query: 481 tcaaagacacattttcgttaagaggattctttttctga 518
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tcaaagacacattttcgttaagaggattctttttctga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
