Query= MSMg01no472_m11.b1 MSMg01no472_m11.b1 CHROMAT_FILE:
MSMg01no472_m11.b1 PHD_FILE: MSMg01no472_m11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:31 2005
(466 letters)
>mm_chr14_101002811_101003677
Length = 867
Score = 818 bits (423), Expect = 0.0
Identities = 452/467 (96%), Gaps = 10/467 (2%)
Strand = Plus / Minus
Query: 1 tttagggacagatattgtgctgtacctcttcatgttcatacttcccacctatctcctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tttagggacagatattgtgctgtacctcttcatgttcatacttcccacctatctcctgcc 577
Query: 61 acctatcacagtaagccttactcagaccccctatctactgcaactggtacaattctccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 acctatcacagtaagccttactcagaccccctatctactgcaactggtacaattctccac 517
Query: 121 agtagaggcagtgcatggatttgaagtgcagatgtgtggccaggtgttgactctatcttt 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 516 agtagaggcagtgcatggatttgaagtgcaaatgtgtggccaggtgttgactctatcttt 457
Query: 181 tctgtagcctcagtgttcttaaatagtggtcagctctcttttcaggcttttgacactgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tctgtagcctcagtgttcttaaatagtggtcagctctcttttcaggcttttgacactgct 397
Query: 241 accgttattgtttcatggtccttttccaatgcaaactgacgtggtcactatgtatgtctc 300
||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 acctttattgtttcatggtacttttccaatgcaaactgacgtggtcactatgtatgtctc 337
Query: 301 tctgctctccactgtgactggccacattggtggtgcc-acagcatttctcatgctaactg 359
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 336 tctgctctccactgtgactggccacattggtggtgccaacagcatttctcatgctaactg 277
Query: 360 gtcattttgacaccgcaaagctgcttccacagcttgtcctaagaaatgcactccttgagt 419
||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 276 gtcattttgacactgcaaagctgcttccacagcttgtcctaagaaatgtactccttgagt 217
Query: 420 tttgaattgaaacacccaatttaccagagaaatagtttcatattcac 466
||||||||||||| |||||||||||||||||||||||||
Sbjct: 216 tttgaattgaaac---------accagagaaatagtttcatattcac 179
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 867
Length adjustment: 10
Effective length of query: 456
Effective length of database: 857
Effective search space: 390792
Effective search space used: 390792
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_m11.g1 MSMg01no472_m11.g1 CHROMAT_FILE:
MSMg01no472_m11.g1 PHD_FILE: MSMg01no472_m11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:31 2005
(420 letters)
>mm_chr14_100868286_100869105
Length = 820
Score = 770 bits (398), Expect = 0.0
Identities = 415/422 (98%), Gaps = 4/422 (0%)
Strand = Plus / Plus
Query: 1 caggacaatcaggactacacaaagaaactctgtctcaaacaacaacaaaaaacaacaaca 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggacaatcagaactacacaaagaaactctgtctcaaacaacaacaaaaaacaacaaca 260
Query: 61 cccaacaaaccaaacaaaaaattgcattgttgttgtcagtgtacactaatacaactctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccaacaaaccaaacaaaaaattgcattgttgttgtcagtgtacactaatacaactctaa 320
Query: 121 aagtatccctacgagacattcatagcaatgtaggctacacattcctcctttctagcaaac 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 aagtatccctacgagacattcatagcagtgtaggctacacattcctcctttctagcaaac 380
Query: 181 tctaattactctttcaggactcattttgaatggtttctatagattacctcctatgattcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctaattactctttcaggactcattttgaatggtttctatagattacctcctatgattcc 440
Query: 241 cttgaccactctctggtgtaggtgatatagtatgtatttcacagatgagagaaatgatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttgaccactctctggtgtaggtgatatagtatgtatttcacagatgagagaaatgatag 500
Query: 301 cttgaaaggttaaatagcactgctccaaaaatttataattgttacatcaagggtttgaat 360
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 501 cttgaaaggttaaatagcactgctccaaa--tttataattgttacatcaagggtttgaat 558
Query: 361 gcgtatctttcttatgctaacatttctgtttttttttt--ttcttttttttttcttttcg 418
|||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 559 gcgtatctttcttatgctaacatttctgttttttttttcttttttttttttttcttttcg 618
Query: 419 ag 420
||
Sbjct: 619 ag 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
