MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-473F04
Chromosome	14 (Build37)
Map Location	74,603,436 - 74,603,912
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Rb1, P2ry5, Itm2b, LOC100043152, Med4, Nudt15, Sucla2, LOC100043734, EG629578
Downstream gene	LOC629583, Htr2a, LOC668508, Esd, Lrch1, ENSMUSG00000075519, LOC100043169, 5031414D18Rik, 4921509B22Rik, LOC100043176, Lcp1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Rb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19645 MGI:97874
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	P2ry5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67168 MGI:1914418
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itm2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16432 MGI:1309517
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043152 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043152
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Med4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67381 MGI:1914631
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nudt15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214254 MGI:2443366
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sucla2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20916 MGI:1306775
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043734 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043734
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 1756 ESTs, 6 Proteins

name	EG629578 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629578 MGI:3646710
definition	note : predicted gene, EG629578 pseudo : _no_value

name	LOC629583 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629583
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	Htr2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15558 MGI:109521
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668508 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668508
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Esd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13885 MGI:95421
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrch1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380916 MGI:2443390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	ENSMUSG00000075519 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100038618 MGI:3642004
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	LOC100043169 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043169
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	5031414D18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:271221 MGI:2685590
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4921509B22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70859 MGI:1918109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 2 Proteins

name	LOC100043176 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043176
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs

name	Lcp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18826 MGI:104808
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677678 GeneID:19645 MGI:97874
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinoblastoma 1 transcript_id : NM_009029.1

name	P2ry5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388446 GeneID:67168 MGI:1914418
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : purinergic receptor P2Y, G-protein coupled, 5 transcript_id : NM_175116.3

name	Itm2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892559 GeneID:16432 MGI:1309517
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integral membrane protein 2B transcript_id : NM_008410.2

name	Med4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129849 GeneID:67381 MGI:1914631
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mediator of RNA polymerase II transcription, subunit 4 homolog (yeast) transcript_id : NM_026119.3

name	Nudt15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371342 GeneID:214254 MGI:2443366
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nudix (nucleoside diphosphate linked moiety X)-type motif 15 transcript_id : NM_172527.2

name	Sucla2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381890 GeneID:20916 MGI:1306775
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : succinate-Coenzyme A ligase, ADP-forming, beta subunit transcript_id : NM_011506.2

name	LOC100043734 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265795 GeneID:100043734
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 1755 ESTs, 6 Proteins product : similar to ribosomal protein S6, transcript variant 1 transcript_id : XM_001480836.1

name	LOC100043734 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265797 GeneID:100043734
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1010 ESTs, 6 Proteins product : similar to ribosomal protein S6, transcript variant 2 transcript_id : XM_001480838.1

name	Htr2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27753984 GeneID:15558 MGI:109521
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-hydroxytryptamine (serotonin) receptor 2A transcript_id : NM_172812.1

name	Esd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362881 GeneID:13885 MGI:95421
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : esterase D/formylglutathione hydrolase transcript_id : NM_016903.3

name	Lrch1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:90991703 GeneID:380916 MGI:2443390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine-rich repeats and calponin homology (CH) domain containing 1 transcript_id : NM_001033439.2

name	ENSMUSG00000075519 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265799 GeneID:100038618 MGI:3642004
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : predicted gene, ENSMUSG00000075519 transcript_id : XM_001480848.1

name	LOC100043169 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265672 GeneID:100043169
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100043169 transcript_id : XM_001479669.1

name	5031414D18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38348521 GeneID:271221 MGI:2685590
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5031414D18 gene transcript_id : NM_198642.1

name	4921509B22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94397251 GeneID:70859 MGI:1918109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 2 Proteins product : RIKEN cDNA 4921509B22 gene, transcript variant 2 transcript_id : XM_895010.2

name	LOC100043176 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265674 GeneID:100043176
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs product : hypothetical protein LOC100043176 transcript_id : XM_001479681.1

name	Lcp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130633 GeneID:18826 MGI:104808
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lymphocyte cytosolic protein 1 transcript_id : NM_008879.3

name	Rb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677679 CCDS:CCDS27267.1 GeneID:19645 MGI:97874
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005819 - spindle [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008134 - transcription factor binding [Evidence IPI]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0007050 - cell cycle arrest [Evidence IMP]; GO:0051301 - cell division [Evidence IMP]; GO:0000082 - G1/S transition of mitotic cell cycle [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA] [Evidence IGI]; GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI] [Evidence IDA] [Evidence IMP]; GO:0000074 - regulation of progression through cell cycle [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0051146 - striated muscle cell differentiation [Evidence IGI]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : retinoblastoma 1 protein_id : NP_033055.1

name	P2ry5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424718 CCDS:CCDS27268.1 GeneID:67168 MGI:1914418
definition	GO_function : GO:0045028 - purinergic nucleotide receptor activity, G-protein coupled [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : purinergic receptor (family A group 5) product : purinergic receptor P2Y, G-protein coupled, 5 protein_id : NP_780325.1

name	Itm2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680502 CCDS:CCDS27269.1 GeneID:16432 MGI:1309517
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence TAS] GO_function : GO:0005524 - ATP binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006915 - apoptosis [Evidence IMP] [Evidence IDA]; GO:0006917 - induction of apoptosis [Evidence IGI] codon_start : 1 note : integral membrane protein 2 B product : integral membrane protein 2B protein_id : NP_032436.1

name	Med4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385626 GeneID:67381 MGI:1914631
definition	GO_component : GO:0000119 - mediator complex [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : p36 TRAP/SMCC/PC2 subunit product : vitamin D receptor interacting protein protein_id : NP_080395.1

name	Nudt15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369730 CCDS:CCDS27270.1 GeneID:214254 MGI:2443366
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0008413 - 8-oxo-7,8-dihydroguanine triphosphatase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0009217 - purine deoxyribonucleoside triphosphate catabolism [Evidence IDA]; GO:0000302 - response to reactive oxygen species [Evidence IDA] codon_start : 1 note : MutT homolog 2 product : MTH2 protein protein_id : NP_766115.1

name	Sucla2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46849708 CCDS:CCDS27271.1 GeneID:20916 MGI:1306775
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0004775 - succinate-CoA ligase (ADP-forming) activity [Evidence IEA]; GO:0004774 - succinate-CoA ligase activity [Evidence ISS] GO_process : GO:0006099 - tricarboxylic acid cycle [Evidence IEA] codon_start : 1 product : succinate-Coenzyme A ligase, ADP-forming, beta subunit protein_id : NP_035636.1

name	LOC100043734 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265796 GeneID:100043734
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001480886.1

name	LOC100043734 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265798 GeneID:100043734
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001480888.1

name	Htr2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27753985 CCDS:CCDS27275.1 GeneID:15558 MGI:109521
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : serotonin receptor; 5-hydroxytryptamine 2 receptor; 5-HT2A receptor product : 5-hydroxytryptamine (serotonin) receptor 2 A protein_id : NP_766400.1

name	Esd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13937355 GeneID:13885 MGI:95421
definition	EC_number : 3.1.1.1 GO_function : GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IDA]; GO:0018738 - S-formylglutathione hydrolase activity [Evidence IEA] codon_start : 1 note : esterase 10 product : esterase D/formylglutathione hydrolase protein_id : NP_058599.1

name	Lrch1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:90991704 GeneID:380916 MGI:2443390
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006118 - electron transport [Evidence IEA] codon_start : 1 note : calponin homology (CH) domain containing 1 product : leucine-rich repeats and calponin homology (CH) domain containing 1 protein_id : NP_001028611.2

name	ENSMUSG00000075519 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265800 GeneID:100038618 MGI:3642004
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480898.1

name	LOC100043169 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265673 GeneID:100043169
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479719.1

name	5031414D18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94400840 GeneID:271221 MGI:2685590
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC271221 protein_id : NP_941044.2

name	4921509B22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82954305 GeneID:70859 MGI:1918109
definition	codon_start : 1 product : hypothetical protein LOC70859 isoform 2 protein_id : XP_900103.1

name	LOC100043176 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265675 GeneID:100043176
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479731.1

name	Lcp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543113 CCDS:CCDS27276.1 GeneID:18826 MGI:104808
definition	GO_component : GO:0005884 - actin filament [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0001891 - phagocytic cup [Evidence IDA]; GO:0001726 - ruffle [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0051015 - actin filament binding [Evidence IDA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0051017 - actin filament bundle formation [Evidence IDA]; GO:0009611 - response to wounding [Evidence ISS] codon_start : 1 note : plastin 2, L product : lymphocyte cytosolic protein 1 protein_id : NP_032905.2

name	LOC100043152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043152
definition	number : 1 pseudo : _no_value

name	LOC100043152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043152
definition	number : 2 pseudo : _no_value

name	LOC100043152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043152
definition	number : 3 pseudo : _no_value

name	LOC668508 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668508
definition	number : 1 pseudo : _no_value

name	LOC668508 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668508
definition	number : 2 pseudo : _no_value

name	LOC629583 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265671 GeneID:629583
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to Nuclear autoantigenic sperm protein (histone-binding) pseudo : _no_value transcript_id : XR_034309.1

clone name	MSMg01-471J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139E03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-094F24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-447M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403F07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-122F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506E19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-454E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202B24
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-473F04.T7 (MSMg01no473_f04.b1)	MSMg01-473F04.TJ (MSMg01no473_f04.g1)
ACC	AG555649	AG555650
length	747	743
length of high quality (start - end)	482 (51 - 532)	500 (83 - 582)
definition	CHROMAT_FILE: MSMg01no473_f04.b1 PHD_FILE: MSMg01no473_f04.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:51:21 2005	CHROMAT_FILE: MSMg01no473_f04.g1 PHD_FILE: MSMg01no473_f04.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:51:21 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NTTTGTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CGCGGAATTCAGTCCTATTCACCCCTCTAAGTCTCGGGGAACATTGTAGA AAAATGGACAAAAAGAACTCAATAGCCAGAAGATAGAAAGATACAGAAAT CCTAGCTTCTAGCCATGATACTATCAGTGTAACCAGGAACTCACAGCAAC TCTATTTACATGCATTGAGCCTGTATAATGTAGGCCCCTCAATAGTTAAC CATGGGTGGCAGAGGGCCATGGGACCCTGGCCTTTACTGCTGATAAACGC TCAGAGAAAGAAACTACTGTATTCAGTTTTACTTGGTTATACCGACTAGC CTCCAGTAGATAAATTCTAATCCTATGGTTACACAGAGTGCCCTCCTCAA ACGTGAAGGGCCATGAAAGAGTAGGGCATGGATGGGGGAGGAAATTAGTA GGAAATGGGAGATAGAAAGAGAAGGAGGGAAAATAAGAAAGAATTAAGGC AAAAGCAATCGAAATGTGTTAAATATATATGTATGGATATATATATATAC ATACACATATAGCACACACTCCCACACTTATGTTTTATGTGGCGGGGGGG TGGCGGTCATAAAACCAAGCTTTATTGTTTAACACATGTTGCGAGTTAGG GTTNGACATCGGTGGACTCTGACCTTCTGCTACGGCGTATGTGACTCGCC CTAATTGTGCATCTGATTTTATCGTACCCCTCCGGAGAACTGTAGCA	AAAATTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAGTGGGCTCACAGTCA GAATTGAGGAAGTGACTTTAGATAATGCATATCAACCCAGGGAGATTGAC ATATGGTGATGAAGACTCAAGCTATGTAGGTGATGCTTCTATTAGAAAAT GGATGCTAGTGACTACCTGCAAGCCATGGGTGACTTCGGAAAGGCATGGG ACACACTTTTCATCCCAGCCATTGAACTTGCAGATGCCTTGATCCTGGAC TTAGGCTTCTAGAATAGCAGTGCAATAAGTTTCCACTGTTTAAGGGGCAA CCAGTCCGTATGGTCCTTTGTCATTTCCCTTCTCCCCCAAGGATGGACAC ATGGGACACTCTAAGGACTCCAGCTTTTACTCTAGGTGAAATAGGATTTG ACTTAGACTTTAAAACAAGGGTTCTCAACCTGTGGGTCATGACCCCTTTG GGAGAAAAATGGGCCCTAGGTGACTGTCAGAAAACACAGATACTTATATT ATTATTCATAGCAATAATAAAGTTACAGTTTTGAGGTAATAATGAAAATA ATTTTATAGTTGGGGTCACCAAAACAAGATGAGAAGCTATATTAAGAGGT TGCACCACTAAGAAGGTTGTATAACCGCTGCTTTTAGAGAATATTTCTAG ATGCTATTTATGGCAATCCTGTTTAGGAAAAAAAGGTGGCATN
quality values	Open. Hide. 0 3 7 6 6 6 9 10 10 8 8 8 12 15 19 15 14 12 23 12 12 15 19 17 8 8 8 23 23 41 24 20 20 20 20 15 18 10 12 12 10 10 10 18 23 29 28 28 28 21 24 32 47 47 36 36 36 36 36 36 41 41 37 27 27 10 14 10 15 8 8 11 21 27 59 41 42 42 41 48 48 59 59 57 59 59 57 57 53 42 42 47 50 50 50 57 57 57 57 57 68 47 42 42 42 42 42 50 54 54 57 54 59 68 68 68 54 54 48 48 48 48 57 59 57 54 47 57 57 57 50 51 48 50 50 50 59 68 51 51 50 50 50 47 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 54 54 50 50 50 50 50 50 57 57 57 57 57 57 57 59 68 68 59 59 57 57 57 57 51 51 50 50 57 54 54 59 59 68 68 68 57 57 57 57 57 57 59 59 57 57 57 57 57 57 68 68 68 68 57 57 57 57 57 59 57 57 68 68 68 68 68 68 68 68 59 59 59 57 59 59 59 57 57 59 59 68 68 68 62 62 62 62 62 62 62 62 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 62 62 62 68 62 62 62 62 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 57 57 59 59 59 59 59 59 59 38 38 18 34 34 57 57 57 43 39 39 44 44 59 59 59 57 43 36 36 44 44 68 41 41 33 32 35 44 50 57 57 47 59 35 35 35 47 59 59 59 41 41 18 18 32 38 38 68 68 41 41 20 20 20 41 41 59 59 47 43 37 44 44 57 44 44 29 28 28 44 44 57 59 59 57 57 57 57 57 59 68 68 68 68 68 68 68 59 59 59 59 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 54 54 54 68 57 59 59 57 57 57 50 50 50 57 50 53 50 50 50 53 57 50 53 50 50 50 59 59 59 44 37 22 19 19 21 23 33 47 47 59 43 44 37 37 41 37 23 22 24 18 17 22 32 26 23 23 28 32 32 34 23 23 23 34 37 43 43 43 30 32 20 20 20 19 19 23 32 37 43 37 26 22 11 11 11 17 17 12 9 9 9 9 13 12 23 24 24 28 28 37 32 37 24 25 17 17 13 28 12 11 11 13 13 19 13 13 18 16 10 15 12 16 15 11 11 10 9 9 9 9 9 10 8 8 8 8 8 8 10 23 22 13 12 8 8 8 8 9 11 18 15 16 13 13 10 10 10 10 9 9 9 10 8 8 8 8 8 8 8 8 10 10 9 9 13 10 8 7 6 10 6 6 7 8 6 8 6 6 6 6 6 6 8 10 10 10 10 8 8 8 8 8 8 9 9 9 9 3 0 3 8 6 8 8 8 8 11 10 10 13 11 11 11 9 11 11 11 8 8 8 6 7 8 6 9 12 9 8 8 8 8 8 8 8 8 6 6 8 8 8 8 10 8 8 8 8 8 8 8 10 6 6 8 8 8 10 8 10 6 6 6 6 8 8 9 8 8 8 8 6 6 6 8 8 8 8 8 8 8 8 8 9 9 9 9 6 6 6 6 8 6 6	Open. Hide. 7 7 7 6 6 6 6 7 10 10 10 8 8 8 8 15 23 23 12 12 13 25 28 37 31 34 37 37 37 37 50 50 50 47 47 25 25 11 6 6 6 6 6 8 12 9 15 15 30 26 37 28 37 37 47 36 36 36 36 47 44 50 50 50 46 27 21 11 10 11 11 17 12 12 12 23 19 30 31 31 33 33 41 47 47 47 47 59 59 59 50 50 37 43 40 40 47 42 48 48 48 48 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 68 68 68 68 53 68 68 68 68 68 57 57 57 57 47 57 47 57 57 54 48 48 68 48 48 48 50 50 51 68 68 68 68 68 68 68 68 50 50 50 50 50 50 57 57 50 57 57 50 48 57 57 59 59 59 59 59 68 68 68 57 50 50 50 50 50 50 59 68 68 68 68 59 59 54 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 57 57 57 57 68 57 59 57 57 57 59 59 68 68 57 57 57 57 57 57 52 52 57 57 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 68 68 68 62 62 62 62 68 68 68 68 68 68 68 62 62 68 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 43 44 43 43 35 43 43 62 62 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 59 57 57 57 57 57 57 59 59 57 57 59 57 57 57 44 44 50 57 48 57 57 57 59 68 68 68 57 57 57 57 57 59 59 59 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 57 57 57 57 57 57 48 57 57 54 54 57 57 68 68 68 57 59 59 59 43 47 47 48 46 54 54 57 57 57 57 57 59 59 43 43 43 48 48 48 48 48 48 59 57 57 43 46 43 59 40 40 40 59 41 37 37 37 25 25 25 25 28 30 28 14 14 22 31 40 59 41 46 46 39 39 36 35 39 39 43 59 41 41 41 41 41 46 41 41 37 37 37 44 44 59 59 57 47 47 47 47 43 43 30 30 30 33 37 43 48 48 48 41 47 47 39 30 30 22 19 19 28 31 31 30 17 15 16 19 21 17 24 20 22 20 21 27 19 20 28 37 30 19 19 14 15 15 15 11 12 19 37 37 39 36 39 37 28 30 27 24 27 27 25 19 28 12 12 10 14 12 14 11 9 13 9 8 11 8 17 18 20 22 12 15 15 18 19 20 24 18 18 18 15 17 14 17 15 12 12 12 12 10 13 11 12 12 9 11 12 11 9 8 9 10 8 8 8 8 8 11 17 18 20 15 17 12 14 14 14 8 8 7 7 7 7 9 9 9 9 9 16 10 8 8 8 8 8 16 16 24 19 12 12 12 15 8 8 8 8 8 10 10 8 8 8 10 8 8 8 8 8 8 11 9 15 14 12 12 10 10 8 8 8 8 8 11 9 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no473_f04.b1 MSMg01no473_f04.b1 CHROMAT_FILE:
MSMg01no473_f04.b1 PHD_FILE: MSMg01no473_f04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:21 2005
         (482 letters)



>mm_chr14_74603233_74604114
          Length = 882

 Score =  884 bits (457), Expect = 0.0
 Identities = 472/477 (98%), Gaps = 1/477 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagtcct-attcacccctctaagtctcggggaacattgtagaaaaatggacaaaa 63
           |||||||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 204 gaattcagtcctaaatcacccctccaagtctcggggaacattgtagaaaaatggtcaaaa 263

                                                                       
Query: 64  agaactcaatagccagaagatagaaagatacagaaatcctagcttctagccatgatacta 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agaactcaatagccagaagatagaaagatacagaaatcctagcttctagccatgatacta 323

                                                                       
Query: 124 tcagtgtaaccaggaactcacagcaactctatttacatgcattgagcctgtataatgtag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcagtgtaaccaggaactcacagcaactctatttacatgcattgagcctgtataatgtag 383

                                                                       
Query: 184 gcccctcaatagttaaccatgggtggcagagggccatgggaccctggcctttactgctga 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcccctcaatagttaaccatgggtggcagagggccatgggaccctggcctttactgctga 443

                                                                       
Query: 244 taaacgctcagagaaagaaactactgtattcagttttacttggttataccgactagcctc 303
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tagacgctcagagaaagaaactactgtattcagttttacttggttataccgactagcctc 503

                                                                       
Query: 304 cagtagataaattctaatcctatggttacacagagtgccctcctcaaacgtgaagggcca 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cagtagataaattctaatcctatggttacacagagtgccctcctcaaacgtgaagggcca 563

                                                                       
Query: 364 tgaaagagtagggcatggatgggggaggaaattagtaggaaatgggagatagaaagagaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgaaagagtagggcatggatgggggaggaaattagtaggaaatgggagatagaaagagaa 623

                                                                    
Query: 424 ggagggaaaataagaaagaattaaggcaaaagcaatcgaaatgtgttaaatatatat 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ggagggaaaataagaaagaattaaggcaaaagcaatcgaaatgtgttaaatatatat 680


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space:   411584
Effective search space used:   411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information