Query= MSMg01no474_i04.b1 MSMg01no474_i04.b1 CHROMAT_FILE:
MSMg01no474_i04.b1 PHD_FILE: MSMg01no474_i04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:59 2005
(578 letters)
>mm_chr14_111704576_111705557
Length = 982
Score = 1009 bits (522), Expect = 0.0
Identities = 566/582 (97%), Gaps = 4/582 (0%)
Strand = Plus / Minus
Query: 1 caaatagttttcataatttcctgactgtgagtgagccaaatgtagacacatttctaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 caaatagttttcataatttcctgactgtgagtgagccaaatgtagacacatttctaggca 723
Query: 61 atatgaacaagtcattaattctcagttatgtctaaaagtgctaatattccatcaagcaga 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 722 atatgaacaagtcattaattctcagttatgtctaaaggtgctaatattccatcaagcaga 663
Query: 121 gctctgtgatactgtgatcaccaaagaccatgtttgctgtcagcagactcaatgcttgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gctctgtgatactgtgatcaccaaagaccatgtttgctgtcagcagactcaatgcttgac 603
Query: 181 actaagtatataaatcagagaattgtcagacttatcatacttatgcccaagtatgaattt 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 602 actaagtatataaatcagagaattgtcagaattatcatacttatgcccaagtatgaattt 543
Query: 241 ccactgtttgacatgtaatctgaataatgagctgccaaaaaatgataaact---aagaaa 297
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 542 ccactgtttgacatgtaatctgaataatgagctgccaaaaaatgataaactaagaagaaa 483
Query: 298 gtagaaaagatgtattattcagctaaaggtgaatcaacagaaatttcttgggtgtgtgat 357
||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 482 gtagaaaagatgtattattcagctaaaggggaatcaagggaaatttcttgggtgtgtgat 423
Query: 358 gccttattaaagattttgatgtacaaaacaaatttacatgagatgaacttcacctgaatt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 422 gccttattaaagattttgatgtacaaaacaaatttacatgagatgaacttcacttgaatt 363
Query: 418 tttattttcctacaataactcattctaaagtgccttt-tactgaattagtagttatctct 476
||||||||||||| || ||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 362 tttattttcctacgatcactcattctaaagcgcctttctactgaattagtagttatctct 303
Query: 477 cctaagaaacgttttataacacaccaaattaacttatgaagaattacttctttattcatt 536
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cctaagaaatgttatataacacaccaaattaacttatgaagaattacttctttattcatt 243
Query: 537 ctttgaaaaggaagaagtctttctttgcttgctatgatgatt 578
||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 242 ctttgaaaaggaagaagtctttctttggttgctatgatgatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 982
Length adjustment: 10
Effective length of query: 568
Effective length of database: 972
Effective search space: 552096
Effective search space used: 552096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no474_i04.g1 MSMg01no474_i04.g1 CHROMAT_FILE:
MSMg01no474_i04.g1 PHD_FILE: MSMg01no474_i04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:59 2005
(470 letters)
>mm_chr14_111517791_111518660
Length = 870
Score = 886 bits (458), Expect = 0.0
Identities = 467/470 (99%)
Strand = Plus / Plus
Query: 1 actgcaagtagcttattctttgtgagatctctttggagtgagtgagcaaaatgaagacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgcaagtagcttattctttgtgagatctctttggagtgagtgagcaaaatgaagacaa 260
Query: 61 taaggaatttgaagagcagttgagcttctgaaagtgtaaccatagccaaaatatctattc 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaggaatttgaaaagcagttgagcttctgaaagtgtaaccatagccaaaatatctattc 320
Query: 121 aagatttcaaactgatatcacaggaggcgtgctccctggtctgcatcaactatgtctctg 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 aagatttcaaactgatatcacaggaggcatgctccctggtctgcatcaactatgtctctg 380
Query: 181 gaccctgattgtcagcatattttgtaatgtatctgtgatatatgtttgctattccatatt 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 gaccctgattgtcagcatattttgtaatgtatctgtgataaatgtttgctattccatatt 440
Query: 241 gaaaaatgatccacaagtatgacccaattaaatatacatatttagtattatttattgatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaaaatgatccacaagtatgacccaattaaatatacatatttagtattatttattgatt 500
Query: 301 catattcaaaagtaatcaaattaatcaactactattttagaaaccatatatccttcattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catattcaaaagtaatcaaattaatcaactactattttagaaaccatatatccttcattc 560
Query: 361 tcactaggcaaaatttctgttgctaaacaggtctattttccttacaagtcttatcaattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcactaggcaaaatttctgttgctaaacaggtctattttccttacaagtcttatcaattt 620
Query: 421 atatctggagaatgtaggttgagttttattgtgaaagtgtctatttagtc 470
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atatctggagaatgtaggttgagttttattgtgaaagtgtctatttagtc 670
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
