Query= MSMg01no474_o17.b1 MSMg01no474_o17.b1 CHROMAT_FILE:
MSMg01no474_o17.b1 PHD_FILE: MSMg01no474_o17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:32 2005
(627 letters)
>mm_chr14_114433920_114434946
Length = 1027
Score = 1017 bits (526), Expect = 0.0
Identities = 573/590 (97%), Gaps = 5/590 (0%)
Strand = Plus / Minus
Query: 1 tttttgatggtaggattcattatatttatggagatagaaaatatagttcaggttttagat 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 585 tttttgatggtaggattcattatatttatggagatagaaaatgtagttcaggttttagat 526
Query: 61 gttagcatataaaagactagtcatatcttatgaaataaatatgattatgttagtttttct 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gttaacatataaaagactagtcatatcttatgaaataaatatgattatgttagtttttct 466
Query: 121 gagatcatgtagttggcttatgttgcatttttttcagatgttacattttaatgcgcattt 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 465 gagatcatgtagttggcttatattgcatttttttcagatgttacattttaatgtacattt 406
Query: 181 actgattcttggatagtgtatcacagtgaattccttatatttttttggattcagttatta 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 405 actgattcctggatagtgtatcacagtgaattccttatatttttttggattcagttacta 346
Query: 241 atatgtgtaaaattttttgtggtatatactgtttattctaaattttaattattaaagttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 atatgtgtaaaattttttgtggtatatactgtttattctaaattttaattattaaagttt 286
Query: 301 ttgtattgatttattctattgataagaacaagggatgtttatatttttgccatatttaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ttgtattgatttattctattgataagaacaagggatgtttatatttttgccatatttaga 226
Query: 361 ataccactagtcaattgaagttttctttttaataaaatatgtaaattaattattcaagtt 420
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 225 ataccacttgtcaattgaagttttctttttaataaaatatttaaattaattattcaagtt 166
Query: 421 tagaacagtttaaaatgaagtatgtgttgccatttttttcagtctgtttgtttgtttgtt 480
|||||| ||||||||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 165 tagaactgtttaaaatgaagtatgtgttgcca-ttttttcagtc---tt-tttgtttgtt 111
Query: 481 tgtttgtttgttttcgagacagggtttcactgtatagccctggctgtcctggaactcact 540
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 110 tgtttgtttgttttcgagacagggtttcactgtatagccctggctatcctggaactcact 51
Query: 541 ctgtaaaccaggctggccttgaactcagaaatctgcctgcctctgcctcc 590
||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 ctgtagaccaggctggccttgaactcagaaatctgcctgcctctgcctcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no474_o17.g1 MSMg01no474_o17.g1 CHROMAT_FILE:
MSMg01no474_o17.g1 PHD_FILE: MSMg01no474_o17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:32 2005
(406 letters)
>mm_chr14_114176888_114177693
Length = 806
Score = 777 bits (402), Expect = 0.0
Identities = 405/406 (99%)
Strand = Plus / Plus
Query: 1 agtgggatttaagacagatcataaaagctaaccagggacataaattgccattaaagatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgggatttaagacagatcataaaagctaaccagggacataaattgccattaaagatta 260
Query: 61 ggagacttatatatctttggacttgagaggtctgtcatatttacccttaattttgaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagacttatatatctttggacttgagaggtctgtcatatttacccttaattttgaaaac 320
Query: 121 cacaggattctacctagccatgattcattaacccagttaatataagtctaataaatcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacaggattctacctagccatgattcattaacccagttaatataagtctaataaatcacc 380
Query: 181 ttaagttcaactgggtccttgaataatatgttttgcagtagcaatctataaatcacatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaagttcaactgggtccttgaataatatgttttgcagtagcaatctataaatcacatgt 440
Query: 241 taggtaaaggacctttatccttgctaaccaaaaaagaggtgaagcatagctccatttatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taggtaaaggacctttatccttgctaaccaaaaaagaggtgaagcatagctccatttatt 500
Query: 301 ttgtagggaaactctttgtgtttcctccatctgtcagaccttttatttgtcaaatttgct 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgtagggaaactcttcgtgtttcctccatctgtcagaccttttatttgtcaaatttgct 560
Query: 361 ttcaaatacctactcagtttcgttgcactaagatgtaaaaattgaa 406
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcaaatacctactcagtttcgttgcactaagatgtaaaaattgaa 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
