Query= MSMg01no476_a14.b1 MSMg01no476_a14.b1 CHROMAT_FILE:
MSMg01no476_a14.b1 PHD_FILE: MSMg01no476_a14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:00 2005
(247 letters)
>mm_chr14_120475920_120476566
Length = 647
Score = 408 bits (211), Expect = e-118
Identities = 235/251 (93%), Gaps = 14/251 (5%)
Strand = Plus / Minus
Query: 2 tccctatggaaggacagattttattattttctggctttcgctatagggaagcaggccagt 61
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 576 tccctatggaaggacagattttattattttctggcttccgctatagggaagcaggccagt 517
Query: 62 gccagttgattcttcacgttgtgacggtgttagcttgtttgttttaacgtggctgagtta 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gccagttgattcttcacgttgtgacggtgttagcttgtttgttttaacgtggctgagtta 457
Query: 122 g-------tttcccccccccccccttggttgctttcagatagtttaaagtcagaaccgtt 174
| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gtttttttttt-------ccccccttggttgctttcagatagtttaaagtcagaaccgtt 404
Query: 175 gatggatctctaaataagaatcgcgtctgtgtttaacacattgacttcaggcatattaca 234
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gatggaactctaaataagaatcgcgtctgtgtttaacacattgacttcaggcatattaca 344
Query: 235 aagaccaagaa 245
|||||||||||
Sbjct: 343 aagaccaagaa 333
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no476_a14.g1 MSMg01no476_a14.g1 CHROMAT_FILE:
MSMg01no476_a14.g1 PHD_FILE: MSMg01no476_a14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:01 2005
(238 letters)
>mm_chr14_120350267_120350904
Length = 638
Score = 429 bits (222), Expect = e-125
Identities = 234/238 (98%)
Strand = Plus / Plus
Query: 1 tcagaggtctgacgggggaggtgcatcttctgggcatctttgaatgggggatttcagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagaggtctgacgggggaggtgcatcttctgggcatctttgaatgggggatttcagaag 260
Query: 61 actagggccttggaaaccttcaagagggaaacacgtgggaagagtcagagccagatctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actagggccttggaaaccttcaagagggaaacacgtgggaagagtcagagccagatctgg 320
Query: 121 gcagaagtgatgttctgtgctaacttaaaatcttcccatgagtccttgtccctctcttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 321 gcagaagtgatgttctgtgctaacttaaaatcttcccatgagtccttgtccttctctaaa 380
Query: 181 gagatgaacaactcagactgggacaggacagtaaggctacccaagggctcactggaga 238
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 gagatgatcaactcagactgggacaggacagtaaggttacccaagggctcactggaga 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
