Query= MSMg01no476_g22.b1 MSMg01no476_g22.b1 CHROMAT_FILE:
MSMg01no476_g22.b1 PHD_FILE: MSMg01no476_g22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:32 2005
(493 letters)
>mm_chr14_86111724_86112615
Length = 892
Score = 878 bits (454), Expect = 0.0
Identities = 481/490 (98%), Gaps = 1/490 (0%)
Strand = Plus / Minus
Query: 4 gaattcagtaggattttctcacaagaaataaattataaggttaattttagttctgtttgg 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gaattcagtaggattttgtcacaagaaataaattataaggttaattttagttctgtttgg 633
Query: 64 ttcgtttgttgtttttttaggtagtttaattgtgatacaattatttgggaaatacttaag 123
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 632 ttcgtttgttg-ttttttaggtagtttaattgtgatacaattatttgggaaatactaaag 574
Query: 124 tgttcaaatacaaacatagaatgccttttttgttcatctaacaatctccaaacatcataa 183
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 573 tgttcaaatacaaacatagaatgcctttcttgttcatctaacaatctccaaacatcataa 514
Query: 184 ttttcagggcactttgatgtacataaagggtgtaagtttaactggtaaataaagtgcctc 243
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tttacagggcactttgatgtacataaagggtgtaagtttaactggtaaataaagtgcctc 454
Query: 244 aataaccaactgaagtaggtatcattaaccttgattgtctctagttttatcaaagcacac 303
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 453 aataaccaactgaagtaggtatcattaaccttgattgccactagttttatcaaagcacac 394
Query: 304 tgaactaaatatctgtgctgatttatgtagctcttcagtgacaaaaacagaatgaaaatc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tgaactaaatatctgtgctgatttatgtagctcttcagtgacaaaaacagaatgaaaatc 334
Query: 364 agatacgtgcttcttggtgagctatcatgatttcattcaaggagcttatagacattatag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 agatacgtgcttcttggtgagctatcatgatttcattcaaggagcttatagacattatag 274
Query: 424 gtgaatgtgacataatgacccatcgtagctatgttattaagatgccaatattatccagtc 483
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 273 gtgaatgtgacataatgacccctcgtagccatgttattaagatgccaatattatccagtc 214
Query: 484 agcaaagcaa 493
||||||||||
Sbjct: 213 agcaaagcaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 892
Length adjustment: 10
Effective length of query: 483
Effective length of database: 882
Effective search space: 426006
Effective search space used: 426006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no476_g22.g1 MSMg01no476_g22.g1 CHROMAT_FILE:
MSMg01no476_g22.g1 PHD_FILE: MSMg01no476_g22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:32 2005
(387 letters)
>mm_chr14_85888707_85889493
Length = 787
Score = 702 bits (363), Expect = 0.0
Identities = 381/387 (98%)
Strand = Plus / Plus
Query: 1 cttacattatgcttaattttcaaatagtataagttaaatgcttaatttaacatcttggaa 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttacattctgcttaattttcaaatagtataagttaaatgcttaatttaacatcttggaa 260
Query: 61 attctgaggctaaatgtttgaaagaagctgacttataaccaagacgggatgtgacgtgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attctgaggctaaatgtttgaaagaagctgacttataaccaagacgggatgtgacgtgtg 320
Query: 121 gccttctgattgagcacgtcatggtatctgtgacagacaaatgtgtgcttcattgtaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccttctgattgagcacgtcatggtatctgtgacagacaaatgtgtgcttcattgtaaga 380
Query: 181 tattactaacctggagtatcttgtttgtcttaacaatttagattgaattttacatttttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tattactaacctggagtatcttgtttgtcttaacaatttagattgaattttacatttttc 440
Query: 241 cttccaccgtatttttataaggcaactgaaaaatgtgctctgttttaccatcacagtggt 300
||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttccaccgtaaaatgagaaggcaactgaaaaatgtgctctgttttaccatcacagtggt 500
Query: 301 ttccacctgaaaatcaaaaaaagagtagagacattagagaagctaaaaggaggaagaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttccacctgaaaatcaaaaaaagagtagagacattagagaagctaaaaggaggaagaaaa 560
Query: 361 agggaggagttggggaaggagagttaa 387
|||||||||||||||||||||||||||
Sbjct: 561 agggaggagttggggaaggagagttaa 587
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
