Query= MSMg01no476_l08.b1 MSMg01no476_l08.b1 CHROMAT_FILE:
MSMg01no476_l08.b1 PHD_FILE: MSMg01no476_l08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:54 2005
(298 letters)
>mm_chr14_12830497_12831194
Length = 698
Score = 503 bits (260), Expect = e-147
Identities = 289/300 (96%), Gaps = 4/300 (1%)
Strand = Plus / Plus
Query: 1 caacttgtagtatactaaaattgcttcctcaccttctttcaacttctgagttttctttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caacttgtagtatactaaaattgcttcctcaccttctttcaacttctgagttttctttcc 260
Query: 61 ttgtgtctgaacgtgtcattatttggggacactagacaacacttccacttctttactatt 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtatctgaacgtgtcattatttggggacactagacaacacttccacttctttactatt 320
Query: 121 gtaagaatcaggtcaaattggaagaaatcaggacatgctaatggtgtgttctgaattcta 180
||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||| |
Sbjct: 321 gtaagaatcgggtcaaattggaagaaattaggatatgctaatggtgtgttctgaattcca 380
Query: 181 ttcaggaatttagtgttagagggtcacactacaggcatgctcgtccttcctttgcttggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcaggaatttagtgttagagggtcacactacaggcatgctcgtccttcctttgcttggt 440
Query: 241 gttc--ttctttttgaatcctttttaatggttcatttatgcacgtatcttcttgagggtg 298
|||| | |||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 gttcagtgcttt--gaatcctttttaatggttcatttatgcacgtaacttcttgagggtg 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no476_l08.g1 MSMg01no476_l08.g1 CHROMAT_FILE:
MSMg01no476_l08.g1 PHD_FILE: MSMg01no476_l08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:54 2005
(241 letters)
>mm_chr14_13008293_13008932
Length = 640
Score = 420 bits (217), Expect = e-122
Identities = 235/241 (97%), Gaps = 1/241 (0%)
Strand = Plus / Minus
Query: 1 tgtctcctacacaattctccatggccttatagatgtgtgagaagtgctaaaagaatcaac 60
|||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||
Sbjct: 440 tgtctcctacacaattctccatggccctgtagatgtgtgagaagtggtaaaagaatcaac 381
Query: 61 aatggaaggaataaatgggccagccacaaaggccttcgttcagcaatgcagaacactaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aatggaaggaataaatgggccagccacaaaggccttcgttcagcaatgcagaacactaga 321
Query: 121 taggataaacaaacattataacgtaagtgatcctggccagtcttcctttctggaaactgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 taggataaacaaacattataacgtaagtgatcctggccagtcttcctttctggaaactgt 261
Query: 181 ttcctctcttggagcaacccttgatatcctaactgccaggtaggccttctgtagaatcag 240
|||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||
Sbjct: 260 ttcctctcttggagcaacccctgatatcctaactgccaggtaggcct-ctctagaatcag 202
Query: 241 a 241
|
Sbjct: 201 a 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 640
Length adjustment: 9
Effective length of query: 232
Effective length of database: 631
Effective search space: 146392
Effective search space used: 146392
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
