XXXXXXXXXXXXXXXXXXXXXXXTTTCAAAGAGGATCCGCGGAATTCTTN
CTTGCACAAAACATCCATCTACAGNTAAAATCTTAACACAAATAGGTTCA
GCTAGATTTCTACGACTGCATCTAAAGACATTCTACCTAACATTGACAGC
AAATTGCCCAAGACAAAAAAGGTTCAATAAATAGGCACCAACTCTATTTC
TTTGAATACACACACACTCACATACACACACACATACACACACACACACA
CAGACTCACACACTCACATACTCACACAGTACATGAATTGCACAATGCAT
ACTCGCTTGTTANATTGGCAATGAAGGAAGTTATCAGACTTTTCCATTCC
TACTAATTCATACACAAAGGGTCAAGTTACTATAATTGCAAAATAAAGTC
TTCTAAATGGGAACAGAGAAGTGACTGTGCCATTATGTCCTGCATAAAAA
AATGCTACGTCTTTATTTAAAAATCTAAAACAGAGGCCTCCCCATCCTTT
TCCTTGAAAGTTTGAAACAACTGGCCAGAGGCCATGCTTTTATAAGAGGT
TCCCAAGACCAACAGATCAAGATGGATTGTGTATATAGTCTTAGATCAAA
AGAAAGCATCTGCTATTTGAAAATGCATGGGCTGCATTAACTTTGAGTCT
TAATCAAGGAATGAAGACTGACAGCGCCTTCTCCTATGGNGGTTGTATGT
AGTAAAGTATGTGCTTTTGTAAAAATGACAGT

GGTGAGGCCTGGGGGCGCCGGTTCACATCAGTAGGNGAANNANAGAATAC
AAAAGAGAGGGGTACCTGAGGAAACCGAATGGCAGAGAAGCACCTGAAAT
ATGTTCAACAATCTTAATCATCAGGGAAATGCAAATCAAAACAACACTGA
GATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGAC
AGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTG
GTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTTC
TTTTATAATTGGACATAGTACTACCGAAGGATCCAGCAATACCTCTCCTG
GGCATTTATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCAC
TATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCA
GATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACA
ATGGAGTACTACTCAGCTATTAAAAGGAATGAATTTATGAAATTCCTAGC
CAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCAC
AAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCCAA
ACCTAGGATTCCCAAGATATAAGGTACAATTTGCTAAACACATGAAACTC
AAGAAGAATGAAGACTGAAGTGTGGAC

Query= MSMg01no478_h16.b1 MSMg01no478_h16.b1 CHROMAT_FILE:
MSMg01no478_h16.b1 PHD_FILE: MSMg01no478_h16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:13 2005
         (593 letters)



>mm_chr14_11814429_11815421
          Length = 993

 Score = 1094 bits (566), Expect = 0.0
 Identities = 587/595 (98%), Gaps = 2/595 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   taaaatcttaacacaaataggttcagctagatttctacgactgcatctaaagacattcta 60
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 199 taaaatcttaacacaaataggttcagctagatttctatgactgcatctaaagacattcta 258

                                                                       
Query: 61  cctaacattgacagcaaattgcccaagacaaaaaaggttcaataaataggcaccaactct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 259 cctaacattgacagcaaattgcccaagacaaaaaaggttcaataaataggcaccatctct 318

                                                                       
Query: 121 atttctttgaatacacacacactcacatacacacacacat--acacacacacacacacag 178
           ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||
Sbjct: 319 atttctttgaatacacacacactcacatacacacacacatacacacacacacacacacag 378

                                                                       
Query: 179 actcacacactcacatactcacacagtacatgaattgcacaatgcatactcgcttgttan 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | 
Sbjct: 379 actcacacactcacatactcacacagtacatgaattgcacaatgcatactcgcttatcat 438

                                                                       
Query: 239 attggcaatgaaggaagttatcagacttttccattcctactaattcatacacaaagggtc 298
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 attggcaacgaaggaagttatcagacttttccattcctactaattcatacacaaagggtc 498

                                                                       
Query: 299 aagttactataattgcaaaataaagtcttctaaatgggaacagagaagtgactgtgccat 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aagttactataattgcaaaataaagtcttctaaatgggaacagagaagtgactgtgccat 558

                                                                       
Query: 359 tatgtcctgcataaaaaaatgctacgtctttatttaaaaatctaaaacagaggcctcccc 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tatgtcctgcataaaaaaatgctacgtctttatttaaaaatctaaaacagaggcctcccc 618

                                                                       
Query: 419 atccttttccttgaaagtttgaaacaactggccagaggccatgcttttataagaggttcc 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 atccttttccttgaaagtttgaaacaactggccagaggccatgcttttataagaggttcc 678

                                                                       
Query: 479 caagaccaacagatcaagatggattgtgtatatagtcttagatcaaaagaaagcatctgc 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 caagaccaacagatcaagatggattgtgtatatagtcttagatcaaaagaaagcatctgc 738

                                                                  
Query: 539 tatttgaaaatgcatgggctgcattaactttgagtcttaatcaaggaatgaagac 593
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tatttgaaaatgcatgggctgcattaactttgagtcttaatcaaggaatgaagac 793


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space:   573089
Effective search space used:   573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)