Query= MSMg01no478_j17.b1 MSMg01no478_j17.b1 CHROMAT_FILE:
MSMg01no478_j17.b1 PHD_FILE: MSMg01no478_j17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:22 2005
(405 letters)
>mm_chr14_13341691_13342495
Length = 805
Score = 775 bits (401), Expect = 0.0
Identities = 404/405 (99%), Gaps = 1/405 (0%)
Strand = Plus / Minus
Query: 1 aatttaaattaaaaaaaaaaacttttaattttggagggttgggaatcaaaccttttgtga 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aatttaaatt-aaaaaaaaaacttttaattttggagggttgggaatcaaaccttttgtga 578
Query: 61 caccaaattggcaatgagaatttggaaggggatgacacaaatattgtcactctgctgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 caccaaattggcaatgagaatttggaaggggatgacacaaatattgtcactctgctgaaa 518
Query: 121 accagcataagcctttccccagataattccaataagcacagagaaattactctaaacaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 accagcataagcctttccccagataattccaataagcacagagaaattactctaaacaca 458
Query: 181 accgctggaatggcagaatctattacgaactcaaaaacctagctagactgctatcagcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 accgctggaatggcagaatctattacgaactcaaaaacctagctagactgctatcagcaa 398
Query: 241 agatccgatctgctttcagtgttcggtgagatgcaggcgaagttacggtctcatgcatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 agatccgatctgctttcagtgttcggtgagatgcaggcgaagttacggtctcatgcatgg 338
Query: 301 tttaaagagcaacacgaagcactggaattgtgatcatttgataaacatgttgatgccaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tttaaagagcaacacgaagcactggaattgtgatcatttgataaacatgttgatgccaat 278
Query: 361 atatttttgcctaaatgcagtaaacttaccagtaagtgatgcaag 405
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 atatttttgcctaaatgcagtaaacttaccagtaagtgatgcaag 233
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_j17.g1 MSMg01no478_j17.g1 CHROMAT_FILE:
MSMg01no478_j17.g1 PHD_FILE: MSMg01no478_j17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:22 2005
(659 letters)
>mm_chr14_13120151_13121209
Length = 1059
Score = 1251 bits (647), Expect = 0.0
Identities = 656/659 (99%)
Strand = Plus / Plus
Query: 1 attgtgtgagagctcatttcccagactcctttgggtggttgtggaataggtggtcaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgtgtgagagctcatttcccagactcctttgggtggttgtggaataggtggtcaaagt 260
Query: 61 gtatgactgcatagggcctcaccatttggccaatgtgcccatttggaataaaatcatatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtatgactgcatagggcctcaccatttggccaatgtgcccatttggaataaaatcatatg 320
Query: 121 tgtaacatttttggctgcttgctatactgtgcttccagaattgtgtggcttcatccataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtaacatttttggctgcttgctatactgtgcttccagaattgtgtggcttcatccataa 380
Query: 181 ttaaaaccctagagtttgcttccattcaagcttccaagagatcctatgactaaaacattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaaaaccctagagtttgcttccattcaagcttccaagagatcctatgactaaaacattt 440
Query: 241 ggtagttttactatattatttaagttataaagcagtgttttcagtttttattgttaaata 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtagtaagactatattatttaagttataaagcagtgttttcagtttttattgttaaata 500
Query: 301 ttttcatcgataggcatgatacagctatcttctatcctcactacaggataaagggagagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttcatcgataggcatgatacagctatcttctatcctcactacaggataaagggagagg 560
Query: 361 aaaattcagttatcttctcagcttctggcagtttgatccacagtaatttaagtcacagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaaattcagttatcttctcagcttctggcagtttgatccacagtaatttaagtcacagcc 620
Query: 421 atagtgctaccaaagcattctatattgccatatgtcttacttgcccaatggtgttaacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atagtgctaccaaagcattctatattgccatatgtcttacttgcccaatggtgttaacaa 680
Query: 481 tatttatttttaaatggaaatatataggatactctggaaattgctgtgaaaagttagaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tatttatttttaaatggaaatatataggatactctggaaattgctgtgaaaagttagaga 740
Query: 541 aactaaattggaagacttgatcgctactacctggagcaagtggtgtgctgtttggttttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aactaaattggaagacttgatcgctactacctggagcaagtggtgtgctgtttggttttc 800
Query: 601 aagggtttttcttttaatgagcaagcatctgatgaatgcctggagctgaaagtagagat 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aagggtttttcttttaatgagcaagcatctgatgaatgcctggagctgaaagtagagat 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
