Query= MSMg01no480_c23.b1 MSMg01no480_c23.b1 CHROMAT_FILE:
MSMg01no480_c23.b1 PHD_FILE: MSMg01no480_c23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:25 2005
(627 letters)
>mm_chr14_117639478_117640504
Length = 1027
Score = 1143 bits (591), Expect = 0.0
Identities = 615/623 (98%)
Strand = Plus / Plus
Query: 5 gaattcttctattgtgatattggtgttaaatggatcaaggatgtattccttgtttatgct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttctattgtgatattggtgttaaatggatcaaggatgtattccttgtttatgct 264
Query: 65 aaatgcacagaatgagtcccgggtgtggaaggtaccatgctcagtatagtctcttgagaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaatgcacagaatgagtcccgggtgtggaaggtaccatgctcagtatagtctcttgagaa 324
Query: 125 ccaacaaatgctccagttcatggtgtgctacttcaactagtaactcatctgatgcttcgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccaacaaatgctccagttcatggtgtgctacttcaactagtaactcatctgatgcttcgt 384
Query: 185 cctgggggacagaggagtgcatggtgtgcttttgtctagatgtgatagagcagctttctc 244
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 385 cctgggggacagaggagtgcatggtgtgcttctgtctagatgtgatagagcagctttctc 444
Query: 245 tgtggacctccttgtagatacacccacacttataaacacagatacacataagcacactca 304
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 445 tgtggacctccttgtagatacatccacacttaaaaacacagatacacataagcacactca 504
Query: 305 gagagacatacacatgcaaacacacatatacatagatacacacagatacgcatacacagg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gagagacatacacatgcaaacacacatatacatagatacacacagatacgcatacacagg 564
Query: 365 tccacattcacatagatacatacatagacacagacacacacagagagacatacatataca 424
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgcacattcacatagatacatacatagacacagacacacacagagagacatacatataca 624
Query: 425 aacacatactcataggtacacacagacacaaatacacaaacacatatatgtgcacataga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aacacatactcataggtacacacagacacaaatacacaaacacatatatgtgcacataga 684
Query: 485 cacagacatacacagaaacactcaaatacaaacacagaaacatatacacacagacacaca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cacagacatacacagaaacactcaaatacaaacacagaaacatatacacacagacacaca 744
Query: 545 aatacacatagatgtgcacatatacacaaacacacacacatacatacacatatacgtaca 604
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 745 aatacacatagatgtgcacatatacacaaacacacacacatacatacacatatatgtaca 804
Query: 605 ctggcatacacagagatacatat 627
|||||| ||||||| ||| ||||
Sbjct: 805 ctggcacacacagatatatatat 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_c23.g1 MSMg01no480_c23.g1 CHROMAT_FILE:
MSMg01no480_c23.g1 PHD_FILE: MSMg01no480_c23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:25 2005
(610 letters)
>mm_chr14_117682463_117683470
Length = 1008
Score = 1106 bits (572), Expect = 0.0
Identities = 600/610 (98%), Gaps = 2/610 (0%)
Strand = Plus / Minus
Query: 1 ctaatattacttaaatctagtgaaaggaaaatcacctggaaagtgactgagtgtagtgaa 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ctaatattacttaaatctaatgaaaggaaaatcacctggaaagtgactgagtgtagtgaa 749
Query: 61 cagtagcgcatggagtatagttcttagaaatggtttaatagtgatataatgacaattgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 cagtagcgcatggagtatagttcttagaaatggtttaatagtgatataatgacaattgct 689
Query: 121 gtgggcattttccttcattatctctgtcacataccagtgtttctttagggatccaccctc 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 688 gtgggcattttccttcattatctctgtcacataccagtgtttctctagggatccaccctc 629
Query: 181 acacatgactattacataacctatttagtcatagccacagaaatacttggacttctaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 acacatgactattacataacctatttagtcatagccacagaaatacttggacttctaaca 569
Query: 241 atggattcctgatgacaaatatcgacatctgtgctggccttaaactaaagaaaccccaaa 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 aaggattcctgatgacaaatatcgacatctgtgctggccttaaactaaagaaaccccaaa 509
Query: 301 agataccagggaggcccacataattctgtcgacaggtatgtttatgtgcctctcacaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 agataccagggaggcccacataattctgtcgacaggtatgtttatgtgcctctcacaggc 449
Query: 361 atttgctcttataggcctgttagacatgtacagtgtgtttatcaacaatcaccctgttaa 420
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 448 atttgctc--ataggcctgttagacatgtacagtgtgtttataaacaatcaccctggtaa 391
Query: 421 ttcttatgtactctagtttgggaattgtctcctaatataatcatgccaacactgtttcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ttcttatgtactctagtttgggaattgtctcctaatataatcatgccaacactgtttcat 331
Query: 481 ggagaataagtttaaaacaacatatcctaaaataatcgtcatgtgtgaatgtttacttaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ggagaataagtttaaaacaacatatcctaaaataatcgtcatgtgtgaatgtttacttaa 271
Query: 541 acaatatttccttgctaaatgcctagcattcattaatcaacgttcactcaaactctgatg 600
||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 270 acaatatttccttgctaaacgcctagcgttcattaatcaacgttcacgcaaactctgatg 211
Query: 601 gggttctgat 610
||||||||||
Sbjct: 210 gggttctgat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1008
Length adjustment: 10
Effective length of query: 600
Effective length of database: 998
Effective search space: 598800
Effective search space used: 598800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
