TXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGAACCGCGGAANNC
CNGGNGGTTACTCCTTTCTTGATTACGGCTAGTTGTAGTTTCCAAAAAAA
AAAAAAAAAAAAAAAGAAAGAAACCCTTCTGTATTTATTCAGACATTAAA
TGGTACCCAGACTGAGTTGTTAAATTGACCCCTTCTGAGTGTGTTCAGAA
AGCCCAGCTGCACTTCCTAGGCACTGCATGCAAAGGCTACAGTTTCCCAA
ATTGATAAAACACAGACCTGTCCGCTAAGTTAAACATTTGAGTCAAAGCT
CAGTGGCAAATAGATTCCAACTGTGGCTCTAATATAGGCCGTTCTTGTAA
AAGGAGCCAACTTCATTGGGATGATTGACAGAAGATTCTTCACCATAGCA
ACCAGGGTTATCTCTCTGGAATAACAACATTAACCTCCTTCATAACCAGT
TTTTCATCCTTAGGGATAAAAGGCAGCTGCGTGCATCTTCCGCGATCCTT
TTATTTTTATTTTTGAATGAACTGTTAGGAGCTACATAAAAATAGGACAG
GATGCTGGGAAGCCAAATTAATTTTGAATTCCTCCCGAAAAGAGAGAGAG
GTGGGGGGGGGGGCATTGCAATGTATCTTGTAGGCAGAACAATTAAAGGT
CAGGAAGAGCCCCTGTCTTTTCTGGGCCGGTGCAATTGGCAGGAGATTTT
TATTCATTGACTGCCTCTGCGGTAACCTGCTGCACTGATTCGCTTTGGGT
TGG

AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXAGGTGGGTGGAGGGGGAGGGGGGGTGNNNTACNNAANTGTCTCA
NCCTTACCCTTCTTGTATGNNAATGNGNCCTGGGCTCCTTGGCTTTGATT
TCTCANNAAAATAATAGGTAAAAGAACTAACTTACGGGCCCCACTAAAAC
TTCANGGGGGCTTTAACAAAAATGCCCAAAAAAANTTCANCTTGGGGTCC
TTAACGCTTAACAAATGTTAAAATTCCTTTTATTCCCGGAAACTTCCCCN
CCCCCCCGGGAAGGCCCCCCTTTTTTTTTTTCCCATTTTTTGGAACACCC
CCCCCCCCTCCCGGGTGGGAAAAAAACCCCTTTCTTTTCCCCCCCCCTTT
TTTTAAAAAAATTTTTTTTTTCCCCCCTTTCTCTAAAAAAAAATTTCCCT
AAAAAAAATNTGGACCCCTCTTTTTTCCCATCCGTTTTTTTTTTTTCTTA
CTCCCCCCCCCCAAAAAAATATTATTTCAAAAAAAATAAAAATAAAANAA
ACACCCCTCCTTTTCTTTCTTATTTTTTCCCCCCCACCCCCACCCATCAA
ACCATAAAACATCTCTCTTCTCNCTCCTTTCTTTCTCCTTTTCTTNTCCN
NNTCTTCTCNNNNNACTCCNTCTTTCCCCCCCCCCCTCCTTATCTCNTNC
TNTCCCCCTCTCTCCCCCCCCCCCTCCCTTCCCCCTTTTCTTTCCTCCTT
TCTTCTTCTTCCCCCCCCCACTTTTTTTCTCCCNCCCCTCCCTCTCTTTC
CNNCCTCCCCCTTTTCCCTCCTTCTCCCTCCTTCTATCCCCTCTCTTTTC
CTCTCCCTTTTCCCTCTTTCTCTCTATTTCCTGTCTAGGGTTGG

Query= MSMg01no481_h13.b1 MSMg01no481_h13.b1 CHROMAT_FILE:
MSMg01no481_h13.b1 PHD_FILE: MSMg01no481_h13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:07 2005
         (561 letters)



>mm_chr14_78201735_78202694
          Length = 960

 Score = 1013 bits (524), Expect = 0.0
 Identities = 554/564 (98%), Gaps = 4/564 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cctttcttgattacggctagttgtagtttccaaaaa-aaa-aaa-aaaaaaaaaaagaaa 57
           |||||| ||||||||||||||| ||||||||||||| ||| ||| ||| ||| |||||||
Sbjct: 824 cctttcctgattacggctagttctagtttccaaaaagaaagaaagaaagaaagaaagaaa 765

                                                                       
Query: 58  gaaacccttctgtatttattcagacattaaatggtacccagactgagttgttaaattgac 117
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 gaaacccttctgtatttattcagacattaaatggtacccagactgagttgttaaattgac 705

                                                                       
Query: 118 cccttctgagtgtgttcagaaagcccagctgcacttcctaggcactgcatgcaaaggcta 177
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 cccttctgagtgtgttcagaaagcccagctgcacttcctaggcactgcatgcaaaggcta 645

                                                                       
Query: 178 cagtttcccaaattgataaaacacagacctgtccgctaagttaaacatttgagtcaaagc 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 cagtttcccaaattgataaaacacagacctgtccgctaagttaaacatttgagtcaaagc 585

                                                                       
Query: 238 tcagtggcaaatagattccaactgtggctctaatataggccgttcttgtaaaaggagcca 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tcagtggcaaatagattccaactgtggctctaatataggccgttcttgtaaaaggagcca 525

                                                                       
Query: 298 acttcattgggatgattgacagaagattcttcaccatagcaaccagggttatctctctgg 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 acttcattgggatgattgacagaagattcttcaccatagcaaccagggttatctctctgg 465

                                                                       
Query: 358 aataacaacattaacctccttcataaccagtttttcatccttagggataaaaggcagctg 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 aataacaacattaacctccttcataaccagtttttcatccttagggataaaaggcagctg 405

                                                                       
Query: 418 cgtgcatcttccgcgatccttttatttttatttttgaatgaactgttaggagctacataa 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 cgtgcatcttccgcgatccttttatttttatttttgaatgaactgttaggagctacataa 345

                                                                       
Query: 478 aaataggacaggatgctgggaagccaaattaattttgaattcctcccgaaaagagagaga 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aaataggacaggatgctgggaagccaaattaattttgaattcctcccgaaaagagagaga 285

                                   
Query: 538 ggtgggggggggggcattgcaatg 561
           |||||| || ||| ||||||||||
Sbjct: 284 ggtgggaggaggg-cattgcaatg 262


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 960
Length adjustment: 10
Effective length of query: 551
Effective length of database: 950
Effective search space:   523450
Effective search space used:   523450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)