Query= MSMg01no482_n12.b1 MSMg01no482_n12.b1 CHROMAT_FILE:
MSMg01no482_n12.b1 PHD_FILE: MSMg01no482_n12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:50 2005
(662 letters)
>mm_chr14_55722308_55723369
Length = 1062
Score = 1174 bits (607), Expect = 0.0
Identities = 616/619 (99%)
Strand = Plus / Plus
Query: 44 aggcaattacatggcctctgtgtggcaaatggtcatgtgaggaatgtccagggctgatgg 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aggcaattacatggcctctgtgtggcaaatggtcatgtgaggaatgtccagggctgatgg 303
Query: 104 aggctaagaaaccacaaggcctaaggtgtgcctcctacctgggctagcaagtcgttcatg 163
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 304 aggctaagaaaccacaaggcctaaggtgtgcctcctacctgggccagcaagtcgttcatg 363
Query: 164 gtctcgctactttcttcatggttccgtcccaggatccgaagtaggcggagtatctggacc 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gtctcgctactttcttcatggttccgtcccaggatccgaagtaggcggagtatctggacc 423
Query: 224 tgaaagagattggatcagagtggttcatagggtagggtcatgggtccgaggcaaaaagac 283
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 424 tgaaagagattggatcagagtggttcatagggtagggtcgtgggtccgaggcaaaaagac 483
Query: 284 ctagcattgtagacaacactgcaatgggtctgactcccttttacctccacaggtcccttg 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ctagcattgtagacaacactgcaatgggtctgactcccttttacctccacaggtcccttg 543
Query: 344 gatgggaggaggtcagagttacatagagtcaggggagtttagaacaggagggtttttctc 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gatgggaggaggtcagagttacatagagtcaggggagtttagaacaggagggtttttctc 603
Query: 404 tctgtagctgtggctgtgctggactcactctctagaccaggtctctgcctcacataattc 463
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tctgtagctgtggctgtactggactcactctctagaccaggtctctgcctcacataattc 663
Query: 464 acctgcctctgccaccataccgggctttggaataggcttttttatatggctaccaaactg 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 acctgcctctgccaccataccgggctttggaataggcttttttatatggctaccaaactg 723
Query: 524 gactttcttgtagccacctttcatttccccagtcttacgatgactagagcaatcctgagt 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 gactttcttgtagccacctttcatttccccagtcttacgatgactagagcaatcctgagt 783
Query: 584 ttgctcccttcttacaaggactgggccaaaatgggaagtgaccactggccatggtcttcc 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 ttgctcccttcttacaaggactgggccaaaatgggaagtgaccactggccatggtcttcc 843
Query: 644 tgggaagccttctttgttc 662
|||||||||||||||||||
Sbjct: 844 tgggaagccttctttgttc 862
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_n12.g1 MSMg01no482_n12.g1 CHROMAT_FILE:
MSMg01no482_n12.g1 PHD_FILE: MSMg01no482_n12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:50 2005
(242 letters)
>mm_chr14_55787024_55787666
Length = 643
Score = 451 bits (233), Expect = e-131
Identities = 240/243 (98%), Gaps = 3/243 (1%)
Strand = Plus / Minus
Query: 1 tctgcggagctcgatgaactgggagcaggaagagggaagcgctgaggctgcctataccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tctgcggagctcgatgaactgggagcaggaagagggaagcgctgaggctgcctataccac 383
Query: 61 aggcagagagaaagaaggattagagcaagctgtgaagctggaggctaaagtgtgacaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aggcagagagaaagaaggattagagcaagctgtgaagctggaggctaaagtgtgacaggt 323
Query: 121 gcagccccaaacagagatgccctgcatgctggcctccagctgactccgttgaagccttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gcagccccaaacagagatgccctgcatgctggcctccagctgactccgttgaagccttca 263
Query: 181 ggaaaaggtttcctattcacgc--agagagcaatactaaagganaaatctgtctcctccc 238
|||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 262 ggaaaaggtttcctattcacgcagagagagcaatactaaagga-aaatctgtctcctccc 204
Query: 239 ccc 241
|||
Sbjct: 203 ccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 643
Length adjustment: 9
Effective length of query: 233
Effective length of database: 634
Effective search space: 147722
Effective search space used: 147722
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
