Query= MSMg01no483_b08.b1 MSMg01no483_b08.b1 CHROMAT_FILE:
MSMg01no483_b08.b1 PHD_FILE: MSMg01no483_b08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:09 2005
(589 letters)
>mm_chr14_46886815_46887803
Length = 989
Score = 1102 bits (570), Expect = 0.0
Identities = 578/584 (98%), Gaps = 6/584 (1%)
Strand = Plus / Minus
Query: 5 gaattccactctattcccagtttatactccctggggcaattattaggtacaaaattaaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 gaattccactctattcccagtttatactccctggggcaattattaggtacaaaattaaat 665
Query: 65 taggataggtgaatgtcaagactggggagggattatatgcaaatgaggttccaaatgaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 taggataggtgaatgtcaagactggggagggattatatgcaaatgaggttccaaatgaca 605
Query: 125 taaaaataaactttaaaaaaattaactagccaacctcagaaagatccatccctgttctaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 taaaaataaactttaaaaaaattaactagccaacctcagaaagatccatccctgttctaa 545
Query: 185 gccagaaggcttctcccatagagaacccacctgcattatttttgtactgaagtttcagct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gccagaaggcttctcccatagagaacccacctgcattatttttgtactgaagtttcagct 485
Query: 245 ttaccttggaaatggtcatcccctttgagtttacttccagttggtaagtagatatgcatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ttaccttggaaatggtcatcccctttgagtttacttccagttggtaagtagatatgcatt 425
Query: 305 taacagatattccttctgtttgacacttgcaaaccttatgagatagacactttttatatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 taacagatattccttctgtttgacacttgcaaaccttatgagatagacactttttatatt 365
Query: 365 gggttctttattctctagccttattttgaatatatattatttactgataaaaagaagaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gggttctttattctctagccttattttgaatatatattatttactgataaaaagaagaca 305
Query: 425 ggaataagaagagaatacttggatctcagtagggccctgtgttctctgtgccccatagaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ggaataagaagagaatacttggatctcagtagggccctgtgttctctgtgccccatagaa 245
Query: 485 cacaggaacatctaacggaattattggtagcctaccattttatatatatatatatatata 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cacaggaacatctaacggaattattggtagcctaccattttatatatatatatatatata 185
Query: 545 tatatatatatatacatatatatgtgtgtgtgtgtgtgtgtgtg 588
|||||||| ||||||||||||||||||||||||||||||
Sbjct: 184 tatatata------catatatatgtgtgtgtgtgtgtgtgtgtg 147
Score = 58.7 bits (30), Expect = 1e-12
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 525 tatatatatatatatatatatatatatatatata 558
||||| ||||||||||||||||||||||||||||
Sbjct: 171 tatatgtatatatatatatatatatatatatata 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 3
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space: 566841
Effective search space used: 566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_b08.g1 MSMg01no483_b08.g1 CHROMAT_FILE:
MSMg01no483_b08.g1 PHD_FILE: MSMg01no483_b08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:09 2005
(175 letters)
>mm_chr14_46702429_46703003
Length = 575
Score = 323 bits (167), Expect = 4e-93
Identities = 173/175 (98%), Gaps = 2/175 (1%)
Strand = Plus / Plus
Query: 1 tgtaaacatatgatcaagccatctttgaccccctttaatgggagtggtcaaggaactggc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 tgtaaacatatgatcaagccatctttgaccccctttaatgggagtggtcaaggaactg-c 259
Query: 61 atctgctttcttaaaggagtgcgaaagagaagaaagagagtgaaccctgtggagtcagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atctgctttcttaaaggagtgcgaaagagaagaaagagagtgaaccctgtggagtcagtg 319
Query: 121 gccaagacagggccctgcagggatttcttgggg-gatcagaggatgagctgtgca 174
||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 320 gccaagacagggccctgcagggatttcttggggtgatcagaggatgagctgtgca 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 575
Length adjustment: 8
Effective length of query: 167
Effective length of database: 567
Effective search space: 94689
Effective search space used: 94689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
