Query= MSMg01no483_l20.b1 MSMg01no483_l20.b1 CHROMAT_FILE:
MSMg01no483_l20.b1 PHD_FILE: MSMg01no483_l20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:03 2005
(333 letters)
>mm_chr14_29910873_29911605
Length = 733
Score = 613 bits (317), Expect = e-180
Identities = 329/333 (98%)
Strand = Plus / Plus
Query: 1 aaaaaaaaaaaaaaaaaccttcattaactgactcccaggcgtattcacaaagcacaaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaaaaaaaaaaaaaaaccttcattaactgactcccaggcgtattcacaaagcacaaagc 260
Query: 61 agcccgacccgagtaatttacagcttaaacttggcattcataacccttatcagcacaata 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcccgactcgagtaatttacagcttaaacttggcattcataacccttatcagcacaata 320
Query: 121 tttcattaaaatgaattcgaggcactgatccttgacatttggtggaaattcggagcctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttcattaaaatgaattcgaggcactgatccttgacatttggtggaaattcggagcctgt 380
Query: 181 catagataagctcggcaaacagcacaatttgaaatgtcacatccccacactggaacccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catagataagctcggcaaacagcacaatttgaaatgtcacatccccacactggaacccta 440
Query: 241 cgtttttatttttatttatttaaaacaaaacaattacaattttagagaaaaaccaatgaa 300
|| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 cggctttatttttatttatttaaaacaaaacaattacaattttagaaaaaaaccaatgaa 500
Query: 301 gtcacggatatttctggaaaggggagcatgttg 333
|||||||||||||||||||||||||||||||||
Sbjct: 501 gtcacggatatttctggaaaggggagcatgttg 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_l20.g1 MSMg01no483_l20.g1 CHROMAT_FILE:
MSMg01no483_l20.g1 PHD_FILE: MSMg01no483_l20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:04 2005
(511 letters)
>mm_chr14_30091388_30092298
Length = 911
Score = 764 bits (395), Expect = 0.0
Identities = 439/461 (95%), Gaps = 16/461 (3%)
Strand = Plus / Minus
Query: 51 tcgttctacagtgctttgtatttctccatagcactgattacaacagcgaccagtatctgg 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tcgttctacagtgctttgtatttctccatagcactgattacaacagcgaccagtatctgg 516
Query: 111 cactgttctctctggagtgtttgtcttctccaatagacaaggcagtttctagggggtttt 170
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 515 cactgttctctctggagtgtttgtcttctccaataaacaaggcagtttctagggggtttt 456
Query: 171 ccctaagttttgaactggtaaaatgccctacacacagtaagtacttggtaaacacttgtg 230
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 455 ccctaagttttgaactggtaaaatgccctatacacagtaagtacttggtaaacacttgtg 396
Query: 231 aatagtggaagaatatctggatttaggtcaaggcaagctttccacctctgcctgtgagtc 290
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aatagtggaagaataactggatttaggtcaaggcaagctttccacctctgcctgtgagtc 336
Query: 291 atggactatactgcttactaatgctgtgtgtaccaagggtatggtttaccccttagactt 350
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 335 atggactatactgcttactaatgctgtgtgtaccaagggtatggtttactctttagactt 276
Query: 351 gatcctagaattccaacaggaaggatcctcctcctcctcctcctcctcctcctcctcctt 410
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gatcctagaattccaacaggaaggatcctcctcctcctcctcctcctcctcct------- 223
Query: 411 cacctcctcttcctcctgctcctcctcctgctcctcctcctccccttcccctaccccctc 470
|||||||||||| | ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 222 --cctcctcttcct--t-ctcctcctc---ctcctcctcctccccttcccctaccccctc 171
Query: 471 ctccccct-ccccttcctcctcctcctccttcttttgagta 510
||||||| ||||||||||||||||||||||||||||||||
Sbjct: 170 ttccccctcccccttcctcctcctcctccttcttttgagta 130
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 63
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
