Query= MSMg01no484_o12.b1 MSMg01no484_o12.b1 CHROMAT_FILE:
MSMg01no484_o12.b1 PHD_FILE: MSMg01no484_o12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:38 2005
(325 letters)
>mm_chr14_117413820_117414544
Length = 725
Score = 582 bits (301), Expect = e-171
Identities = 319/325 (98%)
Strand = Plus / Minus
Query: 1 tgctgtagattacaaaacccgtttgcagacttattcatgaggggatgtataaatgccatc 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 525 tgctgtagattacaaaacccgtttgcagacttagtcatgaggggatgtataaatgccatc 466
Query: 61 tcaaaattaggatgcttgttctgtttcttccttggtgaaatggtggcacccagttttact 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tcaaaattagaatgcttgttctgtttcttccttggtgaaatggtggcacccagttttact 406
Query: 121 tggcaaacagaacaggttcagtccatgtgataactgtaagcatagcaaggtcacgggcca 180
||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 405 tggcagacagaacaggttcagtccatgtgataattgtaagcataccaaggtcacgggcca 346
Query: 181 atataaaaacagtacaacagcagcaatgacatcaacagcagtgtctcaccctaggggcaa 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 atatgaaaacagtacaacagcagcaatgacatcaacagcagtgtctcaccctaggggcaa 286
Query: 241 atgctaactttttaatagagaatgctaactcctccacacgtgtctctacactggacagtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atgctaactttttaatagagaatgctaactcctccacacgtgtctctacactggacagtc 226
Query: 301 tatacctgaagaacctgtcttgctt 325
|||||||||||||||||||||||||
Sbjct: 225 tatacctgaagaacctgtcttgctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no484_o12.g1 MSMg01no484_o12.g1 CHROMAT_FILE:
MSMg01no484_o12.g1 PHD_FILE: MSMg01no484_o12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:38 2005
(640 letters)
>mm_chr14_117263028_117264067
Length = 1040
Score = 1187 bits (614), Expect = 0.0
Identities = 633/640 (98%), Gaps = 2/640 (0%)
Strand = Plus / Plus
Query: 1 cagaaaagttatggaacttgaagtttctaaaacccagagttcatgcccttaacttaagga 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 cagaaaagttatggaacttgaagtttctaaaacccagagttcatgcccttgacttaagga 260
Query: 61 aacagccatttactctctcttagctgaaaatcgcaaggtgttttcagatggtttaggaag 120
|| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 aatagccatttactctctcttagctgaaaatcgcaaggtgttttcagatggtataggaag 320
Query: 121 aggaagaaaggctgtttgcaagcaggagatattttcatgagagcatttctgttcatttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggaagaaaggctgtttgcaagcaggagatattttcatgagagcatttctgttcatttcc 380
Query: 181 taattagtctcaaaagagagttatcatttctatgtttatagtaatttattgtagaatttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taattagtctcaaaagagagttatcatttctatgtttatagtaatttattgtagaatttc 440
Query: 241 atagtttaaaaaaatattcatttatgttttcatttatatttataaatttgtgtcatagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atagtttaaaaaaatattcatttatgttttcatttatatttataaatttgtgtcatagtt 500
Query: 301 ttcaaaagaatgtgtcctacacattctaagctctgttttccaaaaattcccttctattag 360
||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcaaaagaatgtttcctaca--ttctaagctctgttttccaaaaattcccttctattag 558
Query: 361 tgttcttcctccttttctccagttgaaacaattctcaaagtttaacattcaacagaattt 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgctcttcctccttttctccagttgaaacaattctcaaagtttaacattcaacagaattt 618
Query: 421 tttcttcttgtatttcttccctcccaattactccagaaaacttcagtgcctcccccctcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tttcttcttgtatttcttccctcccaattactccagaaaacttcagtgcctcccccctcc 678
Query: 481 ccatatctaacagaacacactgcactttcttcatggagtgcttttttgctttcataaatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ccatatctaacagaacacactgcactttcttcatggagtgcttttttgctttcataaatt 738
Query: 541 cttttatgtctccttgaaacagacatgacaggaatgtgtgcatacatcacacactatcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 cttttatgtctccttgaaacagacatgacaggaatgtgtgcatacatcacacactatcca 798
Query: 601 gtccttactgtgcctgcttcctttttggaattcttacccc 640
||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gtccttactgtgcctgcttcctttttggaattcttacccc 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
