MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-485M03
Chromosome	14 (Build37)
Map Location	27,786,449 - 27,786,964
singlet/doublet	singlet
Overlap gene	none
Upstream gene	1110051B16Rik, LOC100039468, LOC100039484, LOC100039175, LOC100039192, LOC100039213, LOC100039227, LOC100039503, LOC100039246, LOC100039257, LOC100039280, LOC100039293, LOC100039527, LOC100039538, 4933413J09Rik, Slmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1
Downstream gene	Hesx1, Il17rd, LOC665333, Arhgef3, LOC100040147, Ccdc66, LOC665370, Erc2
Link	Open Mouse BAC browser

Click to get alignment info.

name	1110051B16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:278672 MGI:1916048
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039468 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039468
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins

name	LOC100039484 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039484
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 44 ESTs, 3 Proteins

name	LOC100039175 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039175
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 99 ESTs, 2 Proteins

name	LOC100039192 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 204 ESTs, 5 Proteins

name	LOC100039213 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039213
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 54 ESTs, 2 Proteins

name	LOC100039227 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 24 ESTs, 1 Protein

name	LOC100039503 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039503
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 44 ESTs, 4 Proteins

name	LOC100039246 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039246
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 99 ESTs, 2 Proteins

name	LOC100039257 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 197 ESTs, 5 Proteins

name	LOC100039280 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039280
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 54 ESTs, 2 Proteins

name	LOC100039293 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039293
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 21 ESTs, 1 Protein

name	LOC100039527 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039527
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins

name	LOC100039538 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039538
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	4933413J09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71106 MGI:1918356
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Slmap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83997 MGI:1933549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039353 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039353
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC665279 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665279
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 70 ESTs, 7 Proteins pseudo : _no_value

name	A630054L15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211922 MGI:2442980
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arf4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11843 MGI:99433
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E430028B21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211948 MGI:2443226
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4921531P07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207778 MGI:2685130
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 1 Protein

name	Dnahc7c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110083 MGI:3639762
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 13 Proteins

name	Asb14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:142687 MGI:2655107
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Appl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72993 MGI:1920243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hesx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15209 MGI:96071
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il17rd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171463 MGI:2159727
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665333 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665333
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 300 ESTs, 11 Proteins pseudo : _no_value

name	Arhgef3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71704 MGI:1918954
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040147 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040147
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Ccdc66 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320234 MGI:2443639
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665370 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665370
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 1 EST, 2 Proteins pseudo : _no_value

name	Erc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238988 MGI:1098749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1110051B16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34419644 GeneID:278672 MGI:1916048
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110051B16 gene transcript_id : NM_183389.1

name	LOC100039468 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265353 GeneID:100039468
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins product : similar to Ubtf protein transcript_id : XM_001472941.1

name	LOC100039484 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265355 GeneID:100039484
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 44 ESTs, 3 Proteins product : similar to Annexin A11 transcript_id : XM_001472963.1

name	LOC100039175 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265328 GeneID:100039175
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 99 ESTs, 2 Proteins product : similar to Placenta specific 9 transcript_id : XM_001472394.1

name	LOC100039192 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265330 GeneID:100039192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 187 ESTs, 4 Proteins product : similar to D14Ertd449e protein, transcript variant 1 transcript_id : XM_001472492.1

name	LOC100039192 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265332 GeneID:100039192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 106 ESTs, 1 Protein product : similar to D14Ertd449e protein, transcript variant 2 transcript_id : XM_001472510.1

name	LOC100039213 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265334 GeneID:100039213
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 54 ESTs, 2 Proteins product : hypothetical protein LOC100039213 transcript_id : XM_001472528.1

name	LOC100039227 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265336 GeneID:100039227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 24 ESTs, 1 Protein product : similar to RIKEN cDNA 1110051B16 gene transcript_id : XM_001472554.1

name	LOC100039503 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265357 GeneID:100039503
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 44 ESTs, 4 Proteins product : similar to Annexin A11 transcript_id : XM_001473015.1

name	LOC100039246 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265338 GeneID:100039246
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 99 ESTs, 2 Proteins product : similar to Placenta specific 9 transcript_id : XM_001472576.1

name	LOC100039257 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265340 GeneID:100039257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 180 ESTs, 4 Proteins product : similar to D14Ertd449e protein, transcript variant 1 transcript_id : XM_001472657.1

name	LOC100039257 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265342 GeneID:100039257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 105 ESTs, 1 Protein product : similar to D14Ertd449e protein, transcript variant 2 transcript_id : XM_001472673.1

name	LOC100039280 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265344 GeneID:100039280
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 54 ESTs, 2 Proteins product : hypothetical protein LOC100039280 transcript_id : XM_001472694.1

name	LOC100039293 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265346 GeneID:100039293
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 21 ESTs, 1 Protein product : similar to RIKEN cDNA 1110051B16 gene transcript_id : XM_001472720.1

name	LOC100039527 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265359 GeneID:100039527
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins product : similar to Ubtf protein transcript_id : XM_001473058.1

name	LOC100039538 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265361 GeneID:100039538
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039538 transcript_id : XM_001473075.1

name	4933413J09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94396734 GeneID:71106 MGI:1918356
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : RIKEN cDNA 4933413J09 gene transcript_id : XM_354798.4

name	Slmap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56605991 GeneID:83997 MGI:1933549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sarcolemma associated protein transcript_id : NM_032008.3

name	LOC100039353 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265348 GeneID:100039353
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to Ribosomal protein L34 transcript_id : XM_001472758.1

name	A630054L15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802933 GeneID:211922 MGI:2442980
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A630054L15 gene transcript_id : NM_145969.2

name	Arf4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131062 GeneID:11843 MGI:99433
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor 4 transcript_id : NM_007479.3

name	E430028B21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40538841 GeneID:211948 MGI:2443226
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E430028B21 gene transcript_id : NM_178668.3

name	4921531P07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94396736 GeneID:207778 MGI:2685130
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 1 Protein product : RIKEN cDNA 4921531P07 gene transcript_id : XM_908445.2

name	Dnahc7c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265371 GeneID:110083 MGI:3639762
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 13 Proteins product : dynein, axonemal, heavy chain 7c transcript_id : XM_976110.2

name	Asb14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:122891865 GeneID:142687 MGI:2655107
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SOCS box-containing protein 14 transcript_id : NM_080856.2

name	Appl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50881952 GeneID:72993 MGI:1920243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 transcript_id : NM_145221.2

name	Hesx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754183 GeneID:15209 MGI:96071
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box gene expressed in ES cells transcript_id : NM_010420.1

name	Il17rd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124378058 GeneID:171463 MGI:2159727
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 17 receptor D transcript_id : NM_134437.3

name	Arhgef3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27229119 GeneID:71704 MGI:1918954
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho guanine nucleotide exchange factor (GEF) 3 transcript_id : NM_027871.1

name	LOC100040147 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265380 GeneID:100040147
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100040147 transcript_id : XM_001474529.1

name	Ccdc66 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118200349 GeneID:320234 MGI:2443639
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 66 transcript_id : NM_177111.3

name	Erc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130543 GeneID:238988 MGI:1098749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ELKS/RAB6-interacting/CAST family member 2 transcript_id : NM_177814.4

name	1110051B16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34419645 CCDS:CCDS26878.1 GeneID:278672 MGI:1916048
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : hypothetical protein LOC278672 protein_id : NP_899245.1

name	LOC100039468 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265354 GeneID:100039468
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472991.1

name	LOC100039484 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265356 GeneID:100039484
definition	codon_start : 1 product : similar to Annexin A11 protein_id : XP_001473013.1

name	LOC100039175 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265329 GeneID:100039175
definition	codon_start : 1 product : similar to Placenta specific 9 protein_id : XP_001472444.1

name	LOC100039192 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265331 GeneID:100039192
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001472542.1

name	LOC100039192 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265333 GeneID:100039192
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001472560.1

name	LOC100039213 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265335 GeneID:100039213
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472578.1

name	LOC100039227 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265337 GeneID:100039227
definition	codon_start : 1 product : similar to RIKEN cDNA 1110051B16 gene protein_id : XP_001472604.1

name	LOC100039503 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265358 GeneID:100039503
definition	codon_start : 1 product : similar to Annexin A11 protein_id : XP_001473065.1

name	LOC100039246 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265339 GeneID:100039246
definition	codon_start : 1 product : similar to Placenta specific 9 protein_id : XP_001472626.1

name	LOC100039257 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265341 GeneID:100039257
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001472707.1

name	LOC100039257 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265343 GeneID:100039257
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001472723.1

name	LOC100039280 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265345 GeneID:100039280
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472744.1

name	LOC100039293 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265347 GeneID:100039293
definition	codon_start : 1 product : similar to RIKEN cDNA 1110051B16 gene protein_id : XP_001472770.1

name	LOC100039527 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265360 GeneID:100039527
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473108.1

name	LOC100039538 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265362 GeneID:100039538
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473125.1

name	4933413J09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94396735 GeneID:71106 MGI:1918356
definition	codon_start : 1 product : hypothetical protein LOC71106 protein_id : XP_354798.3

name	Slmap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56605992 CCDS:CCDS26880.1 GeneID:83997 MGI:1933549
definition	GO_component : GO:0016021 - integral to membrane [Evidence IDA] GO_function : GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : sarcolemmal-associated protein product : sarcolemma associated protein protein_id : NP_114397.3

name	LOC100039353 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265349 GeneID:100039353
definition	codon_start : 1 product : similar to Ribosomal protein L34 protein_id : XP_001472808.1

name	A630054L15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122407 GeneID:211922 MGI:2442980
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : hypothetical protein LOC211922 protein_id : NP_666081.1

name	Arf4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680720 CCDS:CCDS26881.1 GeneID:11843 MGI:99433
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005525 - GTP binding [Evidence TAS]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0015031 - protein transport [Evidence TAS]; GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : ADP-ribosylation factor 4 protein_id : NP_031505.1

name	E430028B21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40538842 CCDS:CCDS26882.1 GeneID:211948 MGI:2443226
definition	GO_function : GO:0004519 - endonuclease activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA] codon_start : 1 product : 2'-phosphodiesterase protein_id : NP_848783.3

name	4921531P07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82953611 GeneID:207778 MGI:2685130
definition	codon_start : 1 product : similar to hCG1779312 protein_id : XP_913538.1

name	Dnahc7c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265372 GeneID:110083 MGI:3639762
definition	codon_start : 1 product : dynein, axonemal, heavy chain 12 protein_id : XP_981204.2

name	Asb14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:122891866 GeneID:142687 MGI:2655107
definition	GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 note : ankyrin repeat domain-containing SOCS box protein 14 product : ankyrin repeat and SOCS box-containing protein 14 protein_id : NP_543132.2

name	Appl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21699066 CCDS:CCDS26883.1 GeneID:72993 MGI:1920243
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005737 - cytoplasm [Evidence ISS]; GO:0010008 - endosome membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA]; GO:0016581 - NuRD complex [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0008283 - cell proliferation [Evidence ISS] codon_start : 1 note : adaptor protein APPL like product : DIP13 alpha protein_id : NP_660256.1

name	Hesx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754184 CCDS:CCDS26884.1 GeneID:15209 MGI:96071
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007420 - brain development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : homeo box gene expressed in ES cells protein_id : NP_034550.1

name	Il17rd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24025662 CCDS:CCDS26885.1 GeneID:171463 MGI:2159727
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence IEA] codon_start : 1 note : similar expression to Fgf genes product : interleukin 17 receptor D protein_id : NP_602319.1

name	Arhgef3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229120 CCDS:CCDS26886.1 GeneID:71704 MGI:1918954
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 product : Rho guanine nucleotide exchange factor (GEF) 3 protein_id : NP_082147.1

name	LOC100040147 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265381 GeneID:100040147
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474579.1

name	Ccdc66 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118200350 GeneID:320234 MGI:2443639
definition	codon_start : 1 product : coiled-coil domain containing 66 protein_id : NP_796085.3

name	Erc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37360977 CCDS:CCDS26887.1 GeneID:238988 MGI:1098749
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0030426 - growth cone [Evidence ISS]; GO:0042734 - presynaptic membrane [Evidence ISS]; GO:0045202 - synapse [Evidence ISS] [Evidence IEA]; GO:0019717 - synaptosome [Evidence IEA] GO_function : GO:0030165 - PDZ domain binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0007416 - synaptogenesis [Evidence ISS] codon_start : 1 product : CAZ-associated structural protein protein_id : NP_808482.2

name	LOC665279 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265350 GeneID:665279
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 70 ESTs, 7 Proteins product : similar to ribosomal protein S8 pseudo : _no_value transcript_id : XR_030865.1

name	LOC665333 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265379 GeneID:665333
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 300 ESTs, 11 Proteins product : similar to voltage dependent anion channel 3 pseudo : _no_value transcript_id : XR_031784.1

name	LOC665370 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265373 GeneID:665370
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 1 EST, 2 Proteins product : similar to Small nuclear RNA activating complex, polypeptide 2 pseudo : _no_value transcript_id : XR_031179.1

clone name	MSMg01-466O04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-331D02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-278A22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-340J10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-426P06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-318F03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-140A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523N18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-126B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417K12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-106N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158K10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-485M03.T7 (MSMg01no485_m03.b1)	MSMg01-485M03.TJ (MSMg01no485_m03.g1)
ACC	AG565126	AG565127
length	736	745
length of high quality (start - end)	521 (50 - 570)	662 (80 - 741)
definition	CHROMAT_FILE: MSMg01no485_m03.b1 PHD_FILE: MSMg01no485_m03.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:07:49 2005	CHROMAT_FILE: MSMg01no485_m03.g1 PHD_FILE: MSMg01no485_m03.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:07:49 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC GCGGAATTCTTTGATTTGCCATGCTTAATCCTGATTTGCTTTCCATAAAA ATAACCAACGGCCTCAAGTTTCCTAGTGTGCATGAAGTCCTGACCTTCCT CTCCAGCACCACCTAAAGTCAGGCATGCTGGCAGATCGCAATGTCTCAGC ATTCAGGAGATGAAGGCAGGACATCAGGAGTTCAAGTTCATCCTTTGTTA CATATTTAAAGCCAGCTTGGGCTATAAGAGACTGTCTTAAAAAAAAAAAA AAAACAAACTCCTTCCTCCCCCTTTTACTAAACAAAGCAAAACCCCACTA ACTTTTTATCAAAAGAAAATATGAATTCTTCAGCTTTAGAGCTGTTTTAA AATAATAAGTGAAAATATACATTTGGATGACCAGGGTATTCAGTCAGCCA AAGTTATGGGCACTTTGCTTTTCTATTTTTATGATCTGACTAAACTACTT TTTTTTTTTTTAATTATTTTATGTATGAGTGCTGTACGTATACCTGTGTG CCAGAAGAGGGCATCAAATAGCAGTCTAGATGGGTGTGAGCCACCATGTG GTTGCTGGGAATTGGACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTA ACTTCTGAGCTATTTCTCCAGCTCTACCCTAATTCCTAATGTAACTCATC AACAGTCTGCTTTAATTTTATAACCAGCTAGGCTTG	TCCACAAGGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATG GCAGAGAAGCACCTGAAAAAATGCTCAACATCCTTAATCATCAGGGAAAT GCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTA AGATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGA GGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTG GAGATCAGTCTGGCGGTTCCTCAGAAAACTGGATATAGTACTACCGGAGG ATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGT AAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGC CAGAAGCTGGAAGGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGA AGATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAAT GAATTTATGAAATTCCTGGCCAAATGGATGGACCTGGAGGGCATCATCCT GAGTGAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGA TAAGTGGATATTAGCCCAAAACCTAAGATACCCAAGATATAAGATACAAT TTCCTAAACACATGAAACTCAAGAAAAATGAAGACTGAAGTGTGA
quality values	Open. Hide. 0 3 6 6 7 13 16 14 11 10 10 12 28 34 33 32 30 25 25 37 41 37 30 29 37 37 37 41 42 30 28 25 23 22 12 7 7 6 6 6 6 9 11 10 10 10 10 12 12 18 21 28 30 31 31 31 31 39 37 47 43 39 23 23 12 13 9 9 6 6 6 6 9 9 13 19 28 30 41 43 37 36 36 38 38 42 53 53 53 53 57 47 47 40 40 40 47 59 50 50 68 68 68 68 68 68 68 68 47 68 68 68 51 51 68 68 68 68 59 59 48 48 47 47 39 37 37 37 42 44 57 57 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 50 50 50 50 50 50 57 59 59 59 68 68 68 68 68 68 68 57 57 57 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 57 57 57 43 47 47 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 59 57 54 54 57 57 57 68 59 59 59 59 59 59 59 68 68 59 59 59 59 59 59 59 57 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 36 24 16 8 8 8 8 8 9 9 12 24 23 47 47 50 50 48 59 48 48 48 57 57 57 57 57 57 57 57 57 59 59 59 59 59 59 59 68 68 68 68 68 59 59 59 59 59 57 57 57 54 54 54 57 57 57 59 59 59 59 59 59 57 57 59 59 59 59 59 59 59 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 59 59 54 54 57 59 57 68 68 57 57 57 57 54 57 57 57 59 54 54 54 54 54 57 57 57 50 50 37 35 35 43 50 57 52 43 57 57 54 54 52 57 52 52 54 54 54 54 57 57 57 57 52 50 37 43 46 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 57 57 57 57 54 44 44 37 37 37 44 44 57 57 68 68 68 68 68 68 68 68 68 68 68 68 57 50 48 48 48 48 48 48 48 48 48 41 41 37 42 42 40 40 31 30 28 33 33 43 40 40 28 28 28 37 37 43 40 47 47 57 32 32 20 19 19 26 26 34 34 28 22 18 17 17 17 28 28 37 41 41 34 34 23 20 12 20 12 16 18 16 16 18 19 22 10 13 13 24 24 28 37 30 30 28 28 20 19 20 28 28 31 30 28 22 22 22 18 18 28 37 37 36 32 28 31 18 21 21 16 19 20 27 32 32 26 23 14 12 18 21 16 20 24 22 23 22 19 30 17 19 16 15 11 10 10 11 11 15 9 9 9 15 17 27 27 32 28 19 19 19 20 16 14 19 18 12 12 13 17 20 23 30 15 15 15 12 13 14 15 19 14 25 14 9 9 8 14 9 10 10 21 16 16 24 17 12 13 10 10 10 12 15 13 11 13 14 13 9 8 10 10 8 9 9 10 10 10 10 21 8 9 9 15 19 17 24 16 17 17 22 15 14 11 11 13 21 22 14 11 10 8 8 8	Open. Hide. 8 8 6 6 7 8 8 8 8 8 8 10 18 23 37 33 32 30 37 31 37 37 37 37 37 37 39 50 50 50 50 47 41 25 23 9 9 9 9 9 9 10 10 13 13 24 24 33 31 35 39 37 47 50 50 47 53 44 59 59 59 42 33 25 15 11 12 11 12 11 13 16 25 19 30 31 33 33 33 37 47 47 47 36 50 50 50 50 42 42 47 47 50 47 57 53 53 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 51 68 68 68 68 68 68 50 50 50 50 50 50 50 50 50 50 68 68 68 68 68 68 68 68 68 50 50 57 57 57 57 57 57 50 50 50 50 50 51 68 50 51 51 51 50 68 68 68 68 68 68 68 68 68 50 51 48 48 48 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 68 57 57 57 57 57 68 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 59 68 59 57 57 57 57 68 68 68 68 68 68 68 68 68 68 57 57 43 47 47 57 59 59 59 57 57 57 57 57 57 57 57 57 57 57 57 57 48 57 48 59 59 59 59 59 59 59 57 57 57 59 59 59 57 57 48 50 50 48 48 54 59 57 57 48 48 43 57 44 48 48 48 48 48 48 57 57 57 57 43 48 48 43 39 39 39 36 37 37 43 36 41 44 44 59 59 47 47 47 48 47 43 39 39 39 43 43 48 48 53 53 48 59 48 37 37 37 37 37 33 37 37 31 31 39 43 44 32 32 37 37 37 31 36 37 31 31 31 26 31 31 39 39 31 32 37 37 37 41 41 37 34 39 32 32 41 37 37 41 41 41 43 46 40 40 43 43 40 40 41 41 37 37 32 27 26 32 37 37 37 37 33 37 37 37 28 28 30 34 37 41 37 31 29 29 32 37 30 30 30 34 28 28 28 39 43 40 36 36 36 34 34 28 28 28 41 37 39 35 32 37 37 46 29 29 26 32 32 23 24 18 17 21 22 16 18 18 34 32 25 24 21 22 19 21 28 34 30 23 21 14 11 12 21 21 37 37 32 32 30 36 31 34 34 25 22 22 27 24 27 31 22 25 24 24 24 18 19 13 12 12 25 25 33 33 30 30 24 28 18 21 18 17 19 11 15 19 23 21 24 21 21 28 28 28 23 15 11 11 13 13 13 11

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no485_m03.b1 MSMg01no485_m03.b1 CHROMAT_FILE:
MSMg01no485_m03.b1 PHD_FILE: MSMg01no485_m03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:49 2005
         (521 letters)



>mm_chr14_27786069_27786989
          Length = 921

 Score =  891 bits (461), Expect = 0.0
 Identities = 502/523 (95%), Gaps = 17/523 (3%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttgat--ttgccatgcttaatcctgatttgctttccataaaaataaccaacgg 62
           ||||||||||||   |||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 gaattctttgatgggtgc--tgcttaatcctgatttgctttccataaaaataaccaacgg 839

                                                                       
Query: 63  cctcaagtttcctagtgtgcatgaagtcctgaccttcctctccagcaccacctaaagtca 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 cctcaagtttcctagtgtgcatgaagtcctgaccttcctctccagcaccacctaaagtca 779

                                                                       
Query: 123 ggcatgctggcagatcgcaatgtctcagcattcaggagatgaaggcaggacatcaggagt 182
           |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 778 ggcatgctggcagatcgcaatgtctcagtattcaggagatgaaggtaggacatcaggagt 719

                                                                       
Query: 183 tcaagttcatcctttgttacatatttaaagccagcttgggctataagagactgtcttaaa 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tcaagttcatcctttgttacatatttaaagccagcttgggctataagagactgtcttaaa 659

                                                                       
Query: 243 aaaaaaaaaaaaacaaactccttcctccccctttt----actaaacaaagcaaaacccca 298
           |||||||| ||| ||||||||||||||||||        |||||||||||||||||||||
Sbjct: 658 aaaaaaaacaaa-caaactccttcctccccc----caaaactaaacaaagcaaaacccca 604

                                                                       
Query: 299 ctaactttttatcaaaagaaaatatgaattcttcagctttagagctgttttaaaataata 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ctaactttttatcaaaagaaaatatgaattcttcagctttagagctgttttaaaataata 544

                                                                       
Query: 359 agtgaaaatatacatttggatgaccagggtattcagtcagccaaagttatgggcactttg 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 agtgaaaatatacatttggatgaccagggtattcagtcagccaaagttatgggcactttg 484

                                                                       
Query: 419 cttttctatttttatgatctgactaaactacttttttttttttt----aattattttatg 474
           ||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||
Sbjct: 483 cttttctatttttatgatctgactaaactacttttttttttttttttaaattattttatg 424

                                                      
Query: 475 tatgagtgctgtacgtatacctgtgtgccagaagagggcatca 517
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tatgagtgctgtacgtatacctgtgtgccagaagagggcatca 381


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space:   465521
Effective search space used:   465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information