Query= MSMg01no486_b16.b1 MSMg01no486_b16.b1 CHROMAT_FILE:
MSMg01no486_b16.b1 PHD_FILE: MSMg01no486_b16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:18 2005
(599 letters)
>mm_chr14_124561551_124562545
Length = 995
Score = 1050 bits (543), Expect = 0.0
Identities = 586/609 (96%), Gaps = 15/609 (2%)
Strand = Plus / Plus
Query: 2 gaattctttatttatctcgttcatttaatggttttaatgactttttgtttaacaacaaca 61
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gaattctttatttattttgttcatttaatggttttaatgactttttgtttaacaacaaca 250
Query: 62 acaacaaaaataacaggtttctctatgacattctcacacataaattataccatgcttttt 121
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 251 acaaaaaaaataacaggtttctctatgatattctcacacataaattataccatgcttttt 310
Query: 122 ctttcctcaaagcc-----------ttctcctttttacgacctgattcctccactgtcaa 170
||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 311 ctttcctcatagccctctctaccccttctcctttttacgacctgattcctccactgtcaa 370
Query: 171 ataacccctttctgctttctttctctgtgtgtgtgcatatatatgtgtgcatgtgtgtgt 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ataacccctttctgctttctttctctgtgtgtgtgcatatatatgtgtgcatgtgtgtgt 430
Query: 231 gttcacatgtgtgtgagtatgtgtgtatttaaatataaatgaaataaaagatacaatatg 290
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 431 gttcacatgtgtgtgagtatgtttgtatttaaatataaatgaaataaaagatacaatatg 490
Query: 291 ttgttcttctttcatttacctctcttgccactctccatctttagttttctgtcctgctca 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ttgttcttctttcatttacctctcttgccactctccatctttagttttctgtcctgctca 550
Query: 351 tagttcccatacaactttcattcaaaatatataaataaatctccaaatctagatttcaca 410
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 551 tagttcccatacaactttcattcaaaatatataagt----ctccaaatctagatttcaca 606
Query: 411 aatgaaaaaaatattactgaagtccactgtgcaagtgctcacagtgacccactaagggag 470
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 607 aatgaaaaaaatattactgaagtccactgtgcaagtgcccacagtgacccactaagggag 666
Query: 471 atatatttttgcagggagactctctactctctgccttgtgtttcttccacaaaagaccct 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 atatatttttgcagggagactctctactctctgccttgtgtttcttccacaaaagaccct 726
Query: 531 ccagtgaccacagtatagacacttgggctattacagaggattatcctggcttgattaaat 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ccagtgaccacagtatagacacttgggctattacagaggattatcctggcttgattaaat 786
Query: 591 atgtttatt 599
|||||||||
Sbjct: 787 atgtttatt 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 995
Length adjustment: 10
Effective length of query: 589
Effective length of database: 985
Effective search space: 580165
Effective search space used: 580165
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no486_b16.g1 MSMg01no486_b16.g1 CHROMAT_FILE:
MSMg01no486_b16.g1 PHD_FILE: MSMg01no486_b16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:18 2005
(423 letters)
>mm_chr14_124718960_124719784
Length = 825
Score = 625 bits (323), Expect = 0.0
Identities = 333/337 (98%), Gaps = 2/337 (0%)
Strand = Plus / Minus
Query: 1 ttttgaactttgagagaaattttatttaaaaaatgcttggaaaaaccatgttatctattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttttgaactttgagagaaattttatttaaaaaatgcttggaaaaaccatgttatctattc 278
Query: 61 tcttaaataacatac--aaaaaaaaaaactagaaacaatgacattaggtggcagaaggag 118
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tcttaaataacatacaaaaaaaaaaaaactagaaacaatgacattaggtggcagaaggag 218
Query: 119 agaacagaattaggagacagaaggagggagcagaatgaagaatgcagaatgcagaaagat 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 agaacagaattaggagacagaaggagggagcagaatgaagaatgcagaatgcagaaagat 158
Query: 179 aattagaaactaaggcagaaggtggagagatagcagaacatggtaaaatataacagtata 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 aattagaaactaaggcagaaggtggagagatagcagaacatggtaaaatataacagtata 98
Query: 239 agaaagagagataaagagagacaaaaaagaagctgcagagagagcaaaatgagcaggcag 298
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 agagagagagataaagagagacaaaaaagaagctgcagagagagcaaaatgagcaggcag 38
Query: 299 ggctctccttaggttttttcttaacagcaagtcagtt 335
||||||||||||||||||||||||||||||| |||||
Sbjct: 37 ggctctccttaggttttttcttaacagcaaggcagtt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 825
Length adjustment: 9
Effective length of query: 414
Effective length of database: 816
Effective search space: 337824
Effective search space used: 337824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
