Query= MSMg01no487_f04.b1 MSMg01no487_f04.b1 CHROMAT_FILE:
MSMg01no487_f04.b1 PHD_FILE: MSMg01no487_f04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:54 2005
(678 letters)
>mm_chr14_75469972_75471051
Length = 1080
Score = 1160 bits (600), Expect = 0.0
Identities = 657/682 (96%), Gaps = 12/682 (1%)
Strand = Plus / Minus
Query: 4 ggaattcttctgtgtcgtagttttaattaggtcacagcaacacaaagtctaactggcaca 63
||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 880 ggaattcttctgtgtggtagttttatttaggtcacagcaacacaaagtctgactggcaca 821
Query: 64 ctatctaaagcacagcccattccataccagcaagccccaagcaatcagggtaccctttca 123
||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 820 ctatctaaaccacagcccattccataccagccagccccaagcaatcagggtaccctttca 761
Query: 124 ttaagaaccagcaaggttcccatcttcaaagtcctatgaaaaccaaacagacccaaatat 183
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 760 ttaagaaccagcaaggttcccatcttcaaagtcctatgaaaactaaacagacccaaa--- 704
Query: 184 ttcctagtctcagcacagtgctcagtgggaggctgctgaacacactcttgacacacaatt 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 -tcctagtctcagcacagtgctcagtgggaggctgctgaacacactcttgacacacaatt 645
Query: 244 ccaggtgcctgaatgttccctggtcctgaagaaacacactagatttatccccctccctca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ccaggtgcctgaatgttccctggtcctgaagaaacacactagatttatccccctccctca 585
Query: 304 aaggcatgtgtcattctcttattcaaagagattcttaattttttatgacattatctctaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aaggcatgtgtcattctcttattcaaagagattcttaattttttatgacattatctctaa 525
Query: 364 at-------tggcctctaatttacataattttcagacatctcaggaaatctatttaaaaa 416
|| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 attggaccctggcctctaatttacataattttcagacatctcaggaaatctatttaaaaa 465
Query: 417 tcgaatgggaattgagtgggcgacgggctccaaggcataggtagccaagcctccctggct 476
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tccaatgggaattgagtgggcgacgggctccaaggcataggtagccaagcctccctggct 405
Query: 477 gtaatggttttctggttcactggcagacagggctccaggcctctgcgccgacacactgta 536
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gtaacagttttctggttcactggcagacagggctccaggcctctgcgccgacacactgta 345
Query: 537 gcaaatttcaacaagaaagacctttgatactttttcatcaaaaatcatacctaacgattg 596
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 344 gcaaatttcaactagaaagacctttgatactttttcatcaaaaatcatacctaaggattg 285
Query: 597 gtggatgctacctgcttcttctcgccactcagtgaaacactttaagctcacatctctgtt 656
| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 284 gcggatgctacctgcttct-ctcgccactcagtgaaacacttcaagctcacatctctgtt 226
Query: 657 ttacaggtaactttatcaagta 678
||||||||||||||||||||||
Sbjct: 225 ttacaggtaactttatcaagta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1080
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1070
Effective search space: 714760
Effective search space used: 714760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no487_f04.g1 MSMg01no487_f04.g1 CHROMAT_FILE:
MSMg01no487_f04.g1 PHD_FILE: MSMg01no487_f04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:54 2005
(433 letters)
>mm_chr14_75337720_75338552
Length = 833
Score = 830 bits (429), Expect = 0.0
Identities = 432/433 (99%)
Strand = Plus / Plus
Query: 1 catagagcagtgaagagtgggaccatgtgaccgaagacgtggaaaagcaaaacgaaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catagagcagtgaagagtgggaccatgtgaccgaagacgtggaaaagcaaaacgaaaaca 260
Query: 61 gtctaaagaggcaaggtaggcagtctattgatggcgcaattttgaactgtcactgtggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtctaaagaggcaaggtaggcagtctattgatggcgcaattttgaactgtcactgtggtc 320
Query: 121 tgcagagatcaagggcattaagtcaggactacgctaaagttctgtaccaggtcaggaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcagagatcaagggcattaagtcaggactacgctaaagttctgtaccaggtcaggaatg 380
Query: 181 ctgacactgtaggacacaccataccacataaacaccaaaaatatggaagagtatcagtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgacactgtaggacacaccataccacataaacaccaaaaatatggaagagtatcagtgg 440
Query: 241 agtacatgacccaacaaatgtacagtgcccatggggtctgctgtcaagagtgtggccata 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 agtacatgacccaacaaatgtacagtgcccatggggtctgctgtcaagagcgtggccata 500
Query: 301 tgggaagccggagaatagaaggtgggcacagtagagcacgctgggaacaattctccaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgggaagccggagaatagaaggtgggcacagtagagcacgctgggaacaattctccaaca 560
Query: 361 ggctcatgccctgccctgttcatctcatgctctctttagggctcatgcagcagagggaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggctcatgccctgccctgttcatctcatgctctctttagggctcatgcagcagagggaac 620
Query: 421 aagggaaacctgg 433
|||||||||||||
Sbjct: 621 aagggaaacctgg 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
