Query= MSMg01no487_p03.b1 MSMg01no487_p03.b1 CHROMAT_FILE:
MSMg01no487_p03.b1 PHD_FILE: MSMg01no487_p03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:42 2005
(650 letters)
>mm_chr14_92272505_92273554
Length = 1050
Score = 953 bits (493), Expect = 0.0
Identities = 514/521 (98%)
Strand = Plus / Minus
Query: 130 ttagcccagaagcatggaatacccaagatacaatacagaccacatgaagctcaagaagaa 189
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1050 ttagcccagaagcatggaatacccaagatacaatacagaccacatgaaactcaagaagaa 991
Query: 190 ggagcaccacagtgtggatacttcagtcctttttaggaggggaaacaaaatacccatgag 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990 ggagcaccacagtgtggatacttcagtcctttttaggaggggaaacaaaatacccatgag 931
Query: 250 aggagttacagagataaagtatggagcagaaactgaaggaaagtcctccagtgactaccc 309
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 930 aggagttacagagataaagtatagagcagaaactgaaggaaagtcctccagtgactaccc 871
Query: 310 cacctgggaatccatcccattactatatttttaatgcccgcaatatagtctttctacatt 369
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 870 cacctgggaatccatcccattactatatttttaatgtttgtaatatagtctttctacatt 811
Query: 370 gtgcaggctaagggatcattgactatagtcctatttatgtcccatcattctatctcttag 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 gtgcaggctaagggatcattgactatagtcctatttatgtcccatcattctatctcttag 751
Query: 430 aaaagtacaattgattgaatataattactattgacctacttaacaatttctgtgatgaat 489
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 aaaagtacaattaattgaatataattactattgacctacttaacaatttctgtgatgaat 691
Query: 490 tttattaagatataatgaagtaacaattgctaatagatcatgatatcaatgtgaatgtca 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tttattaagatataatgaagtaacaattgctaatagatcatgatatcaatgtgaatgtca 631
Query: 550 gtgttaatcattaaactaatgctctgtttgaaggcttacctatacctttaccttcaattg 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gtgttaatcattaaactaatgctctgtttgaaggcttacctatacctttaccttcaattg 571
Query: 610 taagaggacttataattagaatattctttaaatatttatct 650
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 taagaggacttataattagaatattctttaaatatttatct 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no487_p03.g1 MSMg01no487_p03.g1 CHROMAT_FILE:
MSMg01no487_p03.g1 PHD_FILE: MSMg01no487_p03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:42 2005
(663 letters)
>mm_chr14_92184662_92185725
Length = 1064
Score = 1259 bits (651), Expect = 0.0
Identities = 660/663 (99%), Gaps = 1/663 (0%)
Strand = Plus / Plus
Query: 1 aaggacccagtaggtacctcctaataggtcctactccctctataaacaatgaaacaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggacccagtaggtacctcctaataggtcctactccctctataaacaatgaaacaaaaa 260
Query: 61 tatgattcataagagaattaatatatgaatcctacagaaattaatatatgaatcatgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatgattcataagagaattaatatatgaatcctacagaaattaatatatgaatcatgcca 320
Query: 121 tcaaaggatgaatagaaatttatggaagtggggataattttggaggaattctggttgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaaaggatgaatagaaatttatggaagtggggataattttggaggaattctggttgaga 380
Query: 181 aactgaacaccatctgtggcctttacaccagctgtactagaaagagatacagtttattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aactgaacaccatctgtggcctttacaccagctgtactagaaagagatacagtttattca 440
Query: 241 tcttcttctaaaaagggggagactccatcaaatggtacaatagttttagaattatgtagt 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 441 tcttcttctaaaaagggggagactccagcaaatggtacaatagttttagaattatgtagt 500
Query: 301 agtcattaatacatgagtcacaaatgggagaatattaaaaacactaccagaagactttct 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 agtcattaatacatgagtcacaaatgggagaatattataaacactaccagaagactttct 560
Query: 361 cttcttctgcagaaagacagcaattggcatttttatactgaaacatatttattgggtttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttcttctgcagaaagacagcaattggcatttttatactgaaacatatttattgggtttt 620
Query: 421 ctccattctccttgttacagaacaaggcagtgagtggtcctagccaagaacacagtttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctccattctccttgttacagaacaaggcagtgagtggtcctagccaagaacacagtttta 680
Query: 481 agactcagagctctttcaataagcaagcactcactggactgggtaaagttttcttaggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agactcagagctctttcaataagcaagcactcactggactgggtaaagttttcttaggaa 740
Query: 541 acagtgaattttcttacctaacccttctcagcattagagt-gcccaataggtgttaccat 599
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 741 acagtgaattttcttacctaacccttctcagcattagagttgcccaataggtgttaccat 800
Query: 600 ttttttggggggaaggggaaggtcatcctacttcctgcagtttcaaatgtgcctcctttt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttttttggggggaaggggaaggtcatcctacttcctgcagtttcaaatgtgcctcctttt 860
Query: 660 tca 662
|||
Sbjct: 861 tca 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1064
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1054
Effective search space: 688262
Effective search space used: 688262
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
