Query= MSMg01no488_l05.b1 MSMg01no488_l05.b1 CHROMAT_FILE:
MSMg01no488_l05.b1 PHD_FILE: MSMg01no488_l05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:42 2005
(680 letters)
>mm_chr14_90632183_90633263
Length = 1081
Score = 1286 bits (665), Expect = 0.0
Identities = 674/677 (99%), Gaps = 3/677 (0%)
Strand = Plus / Minus
Query: 5 gaattcttattt-tcg-caattagagtagtggtcaaagcaaccaatgatggagtaaatca 62
|||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 gaattcttatttat-gtcaattagagtagtggtcaaagcaaccaatgatggagtaaatca 822
Query: 63 tgttacaaatggcacattcatttctctcttaaaatccttactaaagtagctcaaagtaaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 tgttacaaatggcacattcatttctctcttaaaatccttactaaagtagctcaaagtaaa 762
Query: 123 ctgcctccaatagtatcatggttatattcagtgttatactatgggaaattagttcagcag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 ctgcctccaatagtatcatggttatattcagtgttatactatgggaaattagttcagcag 702
Query: 183 atgttaaacttttttgcagaagcacagataccatgctattcaaatttcaaaaaccattgc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 atgttaaacttttttgcagaagcacagataccatgctattcaaatttcaaaaaccattgc 642
Query: 243 aaagtcctttacaatatcgtaacacaggatcaggaccatatacatatatatatgtatgag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aaagtcctttacaatatcgtaacacaggatcaggaccatatacatatatatatgtatgag 582
Query: 303 aatggttacattatttgagtccgactggtataaacagtgacagattgttgagttccctgt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 aatggttacattatttgagtccgactggtataaacagtgacagattgttgagttccctgt 522
Query: 363 tattactatttatttcccctgtgaatagctgttgttctggtaatgtattcattctgattg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tattactatttatttcccctgtgaatagctgttgttctggtaatgtattcattctgattg 462
Query: 423 aatgctacctctgggagatctacttcacgtggtgtttacggcatcatgtaagtatctatg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aatgctacctctgggagatctacttcacgtggtgtttacggcatcatgtaagtatctatg 402
Query: 483 ctaggaaggaaagaactttaaatttagccagttttactgcacaggggaaatttcgattat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ctaggaaggaaagaactttaaatttagccagttttactgcacaggggaaatttcgattat 342
Query: 543 aaatgcatgtattccagggcacaataattatattttgatgtttctttagtgcactttcta 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 aaatgcatgtattccagggcacaataattatattttgatgtttctttagtgcactttcta 282
Query: 603 catgaaacataacattctataactttaatttcagaaaattaatggactatccttaatgaa 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 catgaaacataacattctataactttaatttcagaaaattaatggactatccttaatgaa 222
Query: 663 tgttgaaaaaatcatag 679
|||||||||||||||||
Sbjct: 221 tgttgaaaaaatcatag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1081
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1071
Effective search space: 717570
Effective search space used: 717570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_l05.g1 MSMg01no488_l05.g1 CHROMAT_FILE:
MSMg01no488_l05.g1 PHD_FILE: MSMg01no488_l05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:42 2005
(648 letters)
>mm_chr14_90605147_90606194
Length = 1048
Score = 1253 bits (648), Expect = 0.0
Identities = 648/648 (100%)
Strand = Plus / Plus
Query: 1 tcaattaaatagtaaaaatgctttagttattctttacaaagaagtgatgtatgactctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaattaaatagtaaaaatgctttagttattctttacaaagaagtgatgtatgactctga 260
Query: 61 agatctgatttaatcattatgtaaaacacatatgaatcaaatccttttcctttaaaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agatctgatttaatcattatgtaaaacacatatgaatcaaatccttttcctttaaaaaaa 320
Query: 121 cattagtatgtaaaaattctgtgttttgttgtattagataaaataagcttttatgtaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattagtatgtaaaaattctgtgttttgttgtattagataaaataagcttttatgtaatt 380
Query: 181 agattgaatgtttaaatttcttctcacagaagtttaaaactgacaaagatcattgcatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agattgaatgtttaaatttcttctcacagaagtttaaaactgacaaagatcattgcatgc 440
Query: 241 attataaaactttgatttattcatttgacaatagtatttctaaatgacataaatcttata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attataaaactttgatttattcatttgacaatagtatttctaaatgacataaatcttata 500
Query: 301 tacgtaactttcattgacataaagctatttttttctttcttttattttaattaggtattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacgtaactttcattgacataaagctatttttttctttcttttattttaattaggtattt 560
Query: 361 tccttatttacatttccaatgctatcccaaaagtcccccatacccacccccctactactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccttatttacatttccaatgctatcccaaaagtcccccatacccacccccctactactc 620
Query: 421 tacccacccactccccctttttggccctggcgttcccctgtactggggcatataaagttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tacccacccactccccctttttggccctggcgttcccctgtactggggcatataaagttt 680
Query: 481 gcaagtccaatgggcctctctttctagtgatggccgactaggccatcttttgatacatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcaagtccaatgggcctctctttctagtgatggccgactaggccatcttttgatacatat 740
Query: 541 gcaactagatgtcaatggatttgcaatattttttgttttgatttgtttttctttattctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcaactagatgtcaatggatttgcaatattttttgttttgatttgtttttctttattctt 800
Query: 601 gtacagtaccttctgagaagagcctccctctcccccccaacttctagt 648
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gtacagtaccttctgagaagagcctccctctcccccccaacttctagt 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
