Query= MSMg01no488_l10.b1 MSMg01no488_l10.b1 CHROMAT_FILE:
MSMg01no488_l10.b1 PHD_FILE: MSMg01no488_l10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:43 2005
(666 letters)
>mm_chr14_58737576_58738641
Length = 1066
Score = 1193 bits (617), Expect = 0.0
Identities = 652/669 (97%), Gaps = 10/669 (1%)
Strand = Plus / Plus
Query: 1 tcccagaaacatgtgacagcttgtcatgaggctgttttattcgggaaccacacccaatgg 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 tcccagaaacatgtgacagcttgtcatgaggctgtcttattcgggaaccacacccaatgg 260
Query: 61 ctctaagcatactcaaaggactatattgggaaacatgtgacaaatgtctggcaatttata 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 ctctaagcatactcaaaggactatattgggaaacatgtgacaaatgtctggcaacttata 320
Query: 121 aatatgtttgattagttactgctgtctagaaagggactaggcactgattagtgtatgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatatgtttgattagttactgctgtctagaaagggactaggcactgattagtgtatgaat 380
Query: 181 attagaaaagtatctgaggattgagacagaactgctatccaggaatagttcccgttcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attagaaaagtatctgaggattgagacagaactgctatccaggaatagttcccgttcctc 440
Query: 241 ccatattggctggaaaacttcaaaagctcggagcaccaggtggagagaggtcacgcctca 300
||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagacaggctggaaaacttcaaaagctcggagcaccaggtggagagaggtcacgcctca 500
Query: 301 gctgtggggagtcatcagcccgagactaagctcggctgcagtctcacctaagatattttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctgtggggagtcatcagcccgagactaagctcggctgcagtctcacctaagatattttt 560
Query: 361 gaagcaatactaaaaaagatcaatctattttgaagtcacttatattcatcttcaaacaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaagcaatactaaaaaagatcaatctattttgaagtcacttatattcatcttcaaacaaa 620
Query: 421 gctcaataatatttatagagataaaaaaacacacagcacccaggaggcacacaaaaacac 480
||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 621 gctcaataatatttatagaga-------acacacagcacccaggaggcacacaaaaacac 673
Query: 481 acagtctggcaactagtaaaaagccaccagccattcaaagagataaagtactaactacaa 540
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gcagtctggcaaccagtaaaaagccaccagccattcaaagagataaagtactaactacaa 733
Query: 541 ggaagaacagacacaaacattagtggtcaatccagcctgacttacaactacaaagacata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ggaagaacagacacaaacattagtggtcaatccagcctgacttacaactacaaagacata 793
Query: 601 cattaaaataagcagaaaaaaaa---gcataaaacaggtacaactgtatttcacatttcc 657
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 794 cattaaaataagcagaaaaaaaaaaagcataaaacaggtacaactgtatttcacatttcc 853
Query: 658 aaaatatca 666
|||||||||
Sbjct: 854 aaaatatca 862
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_l10.g1 MSMg01no488_l10.g1 CHROMAT_FILE:
MSMg01no488_l10.g1 PHD_FILE: MSMg01no488_l10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:43 2005
(651 letters)
>mm_chr14_58794423_58795473
Length = 1051
Score = 1147 bits (593), Expect = 0.0
Identities = 605/609 (99%)
Strand = Plus / Minus
Query: 1 tgtttacttgcatagcaagagttactgcttaaccaagcggcactcagcacgtttgataag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tgtttacttgcatagcaagagttactgcttaaccaagcggcactcagcacgtttgataag 550
Query: 61 agacctgaaagtaagaaatgtatttctttcccccttggaagttagcaattaacttatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 agacctgaaagtaagaaatgtatttctttcccccttggaagttagcaattaacttatgaa 490
Query: 121 aagcatagagatgtgccaggctgattccacaaaggttccagaaggaaacatttacctgct 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 489 aagcatagagatgtgccaggctgattccacaaaggttccagaaggaagcatttacctgct 430
Query: 181 gcttgcctctggtcagcagctagctgtggttcccagagaacaaggaaaccttgctcaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gcttgcctctggtcagcagctagctgtggttcccagagaacaaggaaaccttgctcaaat 370
Query: 241 gacttttcagaaggcagcaggtctttctgagcagagggcagtttatctgttggatggaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gacttttcagaaggcagcaggtctttctgagcagagggcagtttatctgttggatggaag 310
Query: 301 gcatgtggtaagggacagcacaccagtggccattcctccattcagaggaacctgaaagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcatgtggtaagggacagcacaccagtggccattcctccattcagaggaacctgaaagac 250
Query: 361 tgccttgttctgcagccgcagcattcctctgcacctgcctggggcttggtgcttacctca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tgccttgttctgcagccgcagcattcctctgcacctgcctggggcttggtgcttacctca 190
Query: 421 gctttagtcaggcccctgaacccttcccagcaaggccctccatgtacttccttgtagaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gctttagtcaggcccctgaacccttcccagcaaggccctccatgtacttccttgtagaat 130
Query: 481 ctggtttttgccaggaccctgctaagtttgccttaaccagaaccctgctgttacaaaacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 129 ctggtttttgccaggaccctgctaagtttgccttaaccagaaccctgctgtcacaaaacc 70
Query: 541 acatccacctcgttatccaactgaccttgtccctcagctcccattcctcagaggataccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 69 acatccacctcgttatccaactgaccttgtccctcagctcccattcctcaggggatacgc 10
Query: 601 caggcctat 609
|||||||||
Sbjct: 9 caggcctat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
