Query= MSMg01no488_p16.b1 MSMg01no488_p16.b1 CHROMAT_FILE:
MSMg01no488_p16.b1 PHD_FILE: MSMg01no488_p16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:03 2005
(624 letters)
>mm_chr14_60373028_60374052
Length = 1025
Score = 1158 bits (599), Expect = 0.0
Identities = 617/625 (98%), Gaps = 5/625 (0%)
Strand = Plus / Plus
Query: 1 aaaagtttgcacaaatgtttggctacttttaggataaagtccgtgagtggaagaacttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaagtttgcacaaatgtttggctacttttaggataaagtccgtgagtggaagaacttgt 260
Query: 61 ggtgactgtaaactaaacgctccaggtgggtagtttcatagcaacgtcacaccatttttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtgactgtaaactaaacgctccaggtgggtagtttcatagcaacgtcacaccatttttg 320
Query: 121 cttttatactgggaaaatgagttcaaatgagtttatagtccactttataatgtgactgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttttatactgggaaaatgagttcaaatgagtttatagtccactttataatgtgactgat 380
Query: 181 gtgtcatggctaacctgtgctacctttggtgagtaggtttttacccaccttacaaatgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtcatggctaacctgtgctacctttggtgagtaggtttttacccaccttacaaatgct 440
Query: 241 attagcatatatatggggtccctgggtc-tggtcttttctgtctctttgaccaaatttgt 299
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 attagcaaatatatggggtccctgggtcctggtcttttctgtctctttgaccaaatttgt 500
Query: 300 ggatgcatgttagagattgaacccagggcctcgtgctaaattgacccacattttaccatt 359
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggatgcatg----agattgaacccagggcctcgtgctaaattgacccacattttaccatt 556
Query: 360 gagtcatgtcccagccttctttattcaacctttatatatttttaattatcatagttgttc 419
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 557 gagtcatgtcccagccttctttactcaacctttatatatttttaattatcatagttgttc 616
Query: 420 gttaaggccatttcgtgcaaatgtataatgcattttgtgctggtgggtatgtgagctaga 479
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gttaaggccatttcatgcaaatgtataatgcattttgtgctggtgggtatgtgagctaga 676
Query: 480 ccagccattatggaaatcagcatggaggagtccccactcctagtggccagtgccatctac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ccagccattatggaaatcagcatggaggagtccccactcctagtggccagtgccatctac 736
Query: 540 ccctgtgatcttcaataggactccagtggtggcagtttccatgtcaggatgtcgaaacac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ccctgtgatcttcaataggactccagtggtggcagtttccatgtcaggatgtcgaaacac 796
Query: 600 tgttctgaaatattgctcattgcag 624
|||||||||||||||||||||||||
Sbjct: 797 tgttctgaaatattgctcattgcag 821
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1025
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1015
Effective search space: 623210
Effective search space used: 623210
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_p16.g1 MSMg01no488_p16.g1 CHROMAT_FILE:
MSMg01no488_p16.g1 PHD_FILE: MSMg01no488_p16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:03 2005
(608 letters)
>mm_chr14_60546727_60547734
Length = 1008
Score = 967 bits (500), Expect = 0.0
Identities = 586/624 (93%), Gaps = 19/624 (3%)
Strand = Plus / Minus
Query: 1 gcctcgtagcttgttcagcctgctttcttacagcatacaggactaccagcccacaggtgg 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 905 gcctcgtagcttgttcagcctgctttcttacagcatccaggactaccagcccacaggtgg 846
Query: 61 cacagctggcagtgagctctgtggtcacacaatcatcaatgaagggaagaccccacaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 cacagctggcagtgagctctgtggtcacacaatcatcaatgaagggaagaccccacaggc 786
Query: 121 ttaatcttatgcccacctggcaggggccaatcagttttctcaactgagagtctctgtatc 180
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 ttaatcacaggcccacctggcaggggccaatcagttttctcaactgagagtctctgtatc 726
Query: 181 caaatgtatca--ttnng-taaattagcctacgcagtcttcctgctctgtcttccttatt 237
||||||||||| || | ||| |||||| | |||||||||||||||||||||||||||
Sbjct: 725 caaatgtatcaagtt--gcaaaagtagcctgcacagtcttcctgctctgtcttccttatt 668
Query: 238 ataagagccagagtgaaggagacagctgcttaaaaaaaaaaatccaccctggcaccaccc 297
| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 667 agaagagcaagagtgaaggagacagctgcttaaaaaaaaaaatccaccctggcaatactt 608
Query: 298 ctgtcaattcattctggggacagtgacctgatgacccttattaagtctcacttttcaata 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ctgtcaattcattctggggacagtgacctgatgacccttattaagtctcacttttcaata 548
Query: 358 ttgccatattgagatgaagtttccacatgaactttggggacatgttcggtccatagtatc 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ctgccatattgagatgaagtttccacatgaactttggggacatgttcggtccatagtatc 488
Query: 418 gcccttccgtcctttaacttcccactgctcattcttattttgaaaacatcctcctaattc 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gcccttccgtcctttaacttcccactgctcattcttattttgaaaacatcctcctaattc 428
Query: 478 tggtcccaaagcacgccctctccccc----ccaccccca----------ggctgataggc 523
||| |||||||||||||| ||||||| ||||||||| |||||||||||
Sbjct: 427 tggccccaaagcacgccccctcccccacccccacccccacccccacccaggctgataggc 368
Query: 524 attctgcattcaaagctgaggtctctacctgtgatgacaaatggctattggtgtatagtc 583
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 attctgcagccaaagctgaggtctctacctgtgatgacaaatggctattggtgtatagtc 308
Query: 584 tatcctcatgcatagtctcgaaac 607
||||||||||||||||||||||||
Sbjct: 307 tatcctcatgcatagtctcgaaac 284
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
