NCCTCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTGTGTGTTCTGTGTTTTCTATACTTTTCTCAGATTCATCCTCT
ATAGTAGGTAAACCTCAGTTTTATACTCAGGAAGGGCCAAGCTGTGGTTT
AATTATGTATCTATTTCTTGTAGAAGTTCAACTCTTCTGTTATGGATAGC
TCAGACTGTCAGTGGGTGTTCTAGAATCTTGCATTTTCTTTATGGTTGCT
TTTATTCTTTTAAGAATATTTTTTATTGTTATTTACCTTTCTTTAGCCTC
TGTTATTTAGCCTATAAGTTAGTGTGGCTGTTATCTTTCTTGGGGTAATA
CTTGCTGTGATTTAACTAAAAACCTGGATATTTATATAAATATTAGGAAG
AAACAAGAGTTTACTTCATTTGTAAACTATTAACAATTTACATCCTTTCG
AATATCTAGGTTTTCATATTAATAAAATGTGATGATTTGAAAATGTTGTC
TTCAGTATGGAAATAAAAATGCTGAGTGTTTTGCAAAATTGATAAAAACA
AAACAGCCCCCCCCCACCCGCCCAAGAAACCAAAACCCACAAACAGATTA
CATTTCTGAAAGTGTTAAAAGTAACTTCTTTGTGACCGGTAATCTATTTC
TATTGTCATGCACTTAATACGCCTCTTAATAGTCATGTAGAAATTTGCAG
TTTTCTCGGCAGACCAGTTCCACACTTATTAATCATTTTTAACTTTTATG
AAGCAGGTAGTGG

NCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATATCGAATGGCA
GAGAAGCACCTGAAAAAATGTTCAACTTCCTTAATCATCAGGGAAATGCA
AATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGA
TCAAATATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGTA
ATACTCCTCCATTGTTGGTGGGATTGTAGGCTTGTACAACCACTCTGGAA
ATCAGTCTGGAGGTTCCTCATAAAATTGGACATAGTACTACCGGAGGATC
CAGCAATACCTCTCCTGGGCATATATCCAGGAGATGTCCCAACCGGTAAG
AAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAG
AAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAA
TGTGGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAG
TGAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAA
GTGGATATTAGCCCAGAACCTAGGATAACCAAGATATAAGATACAATTTG
CTAAACACATGANACTCACGAAGCATGAAGACTGAAGTGTGGACACTATG
CC

Query= MSMg01no489_d20.b1 MSMg01no489_d20.b1 CHROMAT_FILE:
MSMg01no489_d20.b1 PHD_FILE: MSMg01no489_d20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:24 2005
         (624 letters)



>mm_chr14_106503879_106504914
          Length = 1036

 Score =  994 bits (514), Expect = 0.0
 Identities = 597/632 (94%), Gaps = 16/632 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgtgtgttctgtgttttctatacttttctcagattcatcctctatagtaggtaa 64
           ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 205 gaattctgtgtgtcctgtgttttctatacttttctcagattcagcctctatagtaggtaa 264

                                                                       
Query: 65  acctcagttttatactcaggaagggccaagctgtggtttaattatgtatctatttcttgt 124
           ||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 265 acctcagttttctactcaggaagggccaagctgtgctgtaattatgtatctatttcttgt 324

                                                                       
Query: 125 agaagttcaactcttctgttatggatagctcagactgtcagtgggtgttctagaatcttg 184
           ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 325 agaagttcaactcttttgttatggatagctcaggctgtcagtgggtgttttagaatcttg 384

                                                                       
Query: 185 cattttctttatggttgcttttattcttttaagaatattttttattgttatttacctttc 244
            |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 385 tattttctttatggttgcttttattattttaaaaatattttttattgttatttacctttc 444

                                                                       
Query: 245 tttagcctctgttatttagcctataagttagtgtggctgttatctttcttggggtaatac 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttagcctctgttatttagcctataagttagtgtggctgttatctttcttggggtaatac 504

                                                                       
Query: 305 ttgctgtgatttaactaaaaacctggatatttatataaata-----ttaggaagaaacaa 359
           |||||||||||||| |||||||||||||| |||||||||||     ||||||||||||||
Sbjct: 505 ttgctgtgatttaattaaaaacctggatagttatataaataagatattaggaagaaacaa 564

                                                                       
Query: 360 gagtttacttcatttgtaaactattaacaatttacatcctttcgaatatctaggttttca 419
           |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 565 gagtgtacttcatttgtaaactataaacaatttacatcctttcgaatatctaggttttca 624

                                                                       
Query: 420 tattaataaaatgtgatgatttgaaaatgttgtcttcagtatggaaataaaaatgctgag 479
           ||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 625 tattaataaaatgtgattatttgaaaatgttgacttcagtatggaaataacaatgctgag 684

                                                                       
Query: 480 tgttttgcaaaattgataaaaacaaaaca--g-------cccccccccacccgcccaaga 530
           |||||||||||||||||||||||||||||  |       ||||||||| ||| |||||||
Sbjct: 685 tgttttgcaaaattgataaaaacaaaacaacgtgtccgtccccccccc-ccc-cccaaga 742

                                                                       
Query: 531 aaccaaaacccacaaacagattacatttctgaaagtgttaaaagtaacttctttgtgacc 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 aaccaaaacccacaaacagattacatttctgaaagtgttaaaagtaacttctttgtgacc 802

                                           
Query: 591 ggtaatctatttctattgtcatgcacttaata 622
           ||||||||||||||||||||||||||| ||||
Sbjct: 803 ggtaatctatttctattgtcatgcactcaata 834


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1036
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1026
Effective search space:   629964
Effective search space used:   629964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)