Query= MSMg01no490_o03.b1 MSMg01no490_o03.b1 CHROMAT_FILE:
MSMg01no490_o03.b1 PHD_FILE: MSMg01no490_o03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:36 2005
(606 letters)
>mm_chr14_17890205_17891210
Length = 1006
Score = 1048 bits (542), Expect = 0.0
Identities = 590/606 (97%)
Strand = Plus / Minus
Query: 1 caaagtgcattgatctcttggccaccatctagtgctaaccatttagaccactgtcccttc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 806 caaagtgcattgatctcttggccaccatctagtgctaaccatttagaccattgtcccttc 747
Query: 61 cattctggaagggcgtgacttcatggacttcctgtactcctcttcccagctacgtcctgg 120
|||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 746 cattctggaatggcgtgacttcatggacttcctgtactcttcttcccagctacgtcctgg 687
Query: 121 cacagtcacaaacactcctccaaaggaccgcagccaacagatcactttgaggcctctctt 180
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 686 cacagtcacaaacactcctccaaaggactgcagccaacagatcactttgaggccactctt 627
Query: 181 ttgcccaaatctcctcttcgccgggggttcatttaaaagacaccaatcaacacttcattg 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ttgcccaaatctcctcttcgctgggggttcatttaaaagacaccaatcaacacttcattg 567
Query: 241 ctttattttaacaccctaagcatataattttgccacgaaagatgtttagaggaaaaccat 300
||||| ||||| ||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 566 ctttacagtaacaacctaagcatataattttgccatgaaagatgtttagagcaaaaccat 507
Query: 301 agctcataataaatataaattatggaaatatatataatgtagcagactcagcatggtggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 506 agctcataataaatataaattatggaaatatatataatgtagcagactcagcatgctggc 447
Query: 361 taagttaaagatcttttcaatcacttagaatctggaggacactgtgggggtgtggcatct 420
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 446 taagttaaagatcttttcaatcacttagaatccggaggactctgtgggggtgtggcatct 387
Query: 421 tgcagcactaacaggtacgaagccctagctgggttctgggcctgcaggtgcctgtgtaga 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 386 tgcagcactaacaggtacgaagccctagctgggttctgggcctccaggtgcctgtgtaga 327
Query: 481 gaagaatttatgatctgcggtttgcaaggtttgagtgtgaagtggtgttatgcatccctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gaagaatttatgatctgcggtttgcaaggtttgagtgtgaagtggtgttatgcatccctt 267
Query: 541 ttattttaataacctaaaatgagtaattcactccttcgaagatttgataaaaatcttgga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttattttaataacctaaaatgagtaattcactccttcgaagatttgataaaaatcttgga 207
Query: 601 agtttg 606
||||||
Sbjct: 206 agtttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_o03.g1 MSMg01no490_o03.g1 CHROMAT_FILE:
MSMg01no490_o03.g1 PHD_FILE: MSMg01no490_o03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:36 2005
(654 letters)
>mm_chr14_17852576_17853630
Length = 1055
Score = 1228 bits (635), Expect = 0.0
Identities = 650/655 (99%), Gaps = 1/655 (0%)
Strand = Plus / Plus
Query: 1 acagccaggctacaagagcaagcagggaaggtagccctgtgaatggccaaactgacttgt 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagcctggctacaagagcaagcagggaaggtagccctgtgaatggccaaactgacttgt 260
Query: 61 agggaaatcacaggattgttcagcttctctgaaataacatctgttatttgaaccataaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggaaatcacaggattgttcagcttctctgaaataacatctgttatttgaaccataaaa 320
Query: 121 cagacatgctgaaatctcccagagattgctacaaattgtttttattcttctgtttaatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagacatgctgaaatctcccagagattgctacaaattgtttttattcttctgtttaatga 380
Query: 181 tttttatgaatcaatttgaacaaaaaatagcagtatgcaagcagaatccagagaagacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttttatgaatcaatttgaacaaaaaatagcagtatgcaagcagaatccagagaagacaa 440
Query: 241 attaaatttcagtgacacaacattaagtactattaatatttctttaactaaaaccacaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attaaatttcagtgacacaacattaagtactattaatatttctttaactaaaaccacaaa 500
Query: 301 cccatttggacattaatcctaaagtaatccacaaacttctagggctaattttaggaaaag 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cccatttggacattaatcccaaagtaatccacaaacttctagggctaattttaggaaaag 560
Query: 361 tcaaactttagtctattgcctaacttatacagactttaacttcaaggaagagatgataca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcaaactttagtctattgcctaacttatacagactttaacttcaaggaagagatgataca 620
Query: 421 gaactgtgaatctggctagtatcttttaggtttctgcatcttggaagtaactgttgcaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaactgtgaatctggctagtatcttttaggtttctgcatcttggaagtaactgttgcaac 680
Query: 481 aggacgtgttccaatgggttaaagttcatgtctatatttcaagcctcagcacagtaaggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aggacgtgttccaatgggttaaagttcatgtctatatttcaagcctcagcacagtaaggg 740
Query: 541 ggggg-cacacaacattcattaactatttcctgagtcaatgagtttttctacatggtgtt 599
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggggggcatacaacattcattaactatttcctgagtcaatgagtttttctacatggtgtt 800
Query: 600 gagaatcaaacaatttattgctcagtgtttaaaatcagcttgtcacctctgcagg 654
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 801 gagaatcaaacaatttattgctcagtgtttaaaatcagctagtcacctctgcagg 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1055
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1045
Effective search space: 672980
Effective search space used: 672980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
