Query= MSMg01no490_p17.b1 MSMg01no490_p17.b1 CHROMAT_FILE:
MSMg01no490_p17.b1 PHD_FILE: MSMg01no490_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:44 2005
(564 letters)
>mm_chr14_100888498_100889462
Length = 965
Score = 961 bits (497), Expect = 0.0
Identities = 548/565 (96%), Gaps = 1/565 (0%)
Strand = Plus / Plus
Query: 1 aaatggggtttcatatactgcatttggaatatggattttgaatttggctcagcattcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatggggtttcatatactgcatttggaatatggattttgaatttggctcagcattcatg 260
Query: 61 ttctggaaaggaaatcttaccattcctgaattatggtgaatatttcaaagcaggtattcc 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 ttctggaaaggaaatcttaccattcctgagttatggtgaatatttcaaagcaggtattcc 320
Query: 121 ttgaaccaaatccctagttttcgctgaagaggtttgcctgtctctctaacaggagcacaa 180
||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||
Sbjct: 321 ttgaaccaaatccctagtttttgctgaagaggattgcctgtctctccaacaggagcacac 380
Query: 181 tgtttccattttgccttttaaaaatagctaactacacatgtattttatttttcagctgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtttccattttgccttttaaaaatagctaactacacatgtattttatttttcagctgca 440
Query: 241 tattc-atgtactggagaaaagcaagtgtcttcagaggtttgaacgtcagtacagcaggg 299
|| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatcccaagtactggagaaaagcaagtgtcttcagaggtttgaacgtcagtacagcaggg 500
Query: 300 agcacataaaactgagatcaactcttcctggggattgcctcccattgatgactaatggac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcacataaaactgagatcaactcttcctggggattgcctcccattgatgactaatggac 560
Query: 360 actttctggccgtgcagaaatcaagacactgtgtgcacagaagccatctgtttatctgtt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 561 actttctggccgtgcagaaatcaagacactgtgtgcacagaagccatctgtttatttgtt 620
Query: 420 gcaagtaccatcagggtatatttgcaaagctcacttcttttgtcaagaagggatttctga 479
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcaagtatcatcagggtacatttgcaaagctcacttcttttgtcaagaagggatttctga 680
Query: 480 catttatttgaaaatgcagtagttccttttcccatgacacatcaaacaaacagacgtcct 539
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 681 catttatttgaaaatgcagtagtttcttttcccatgacacatcaaacaaacagacgtcct 740
Query: 540 ccctcacacagaatccatcagacaa 564
||||||||||| ||||||||||||
Sbjct: 741 ccctcacacagcgtccatcagacaa 765
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 965
Length adjustment: 10
Effective length of query: 554
Effective length of database: 955
Effective search space: 529070
Effective search space used: 529070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_p17.g1 MSMg01no490_p17.g1 CHROMAT_FILE:
MSMg01no490_p17.g1 PHD_FILE: MSMg01no490_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:44 2005
(463 letters)
>mm_chr14_101071841_101072704
Length = 864
Score = 820 bits (424), Expect = 0.0
Identities = 450/464 (96%), Gaps = 10/464 (2%)
Strand = Plus / Minus
Query: 1 agaatactcgtcacccttgtaaactcatacagagtgaacttcgccctttctcttatgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 agaatactcgtcacccttgtaaactcatacagagtgaacttcgccctttctcttatgatt 789
Query: 61 agctttctttcactggcagaggaataactggatagtatttaacactttccagtatcttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 agctttctttcactggcagaggaataactggatagtatttaacactttccagtatcttcc 729
Query: 121 atgcatttccccccaactttgactctacagcatggctgagacctacttgaccttacagat 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 728 atgcatttccccccaactttgactttacagcatggctgagacctacttgaccttacagat 669
Query: 181 catatagttagtgttgcatgttggtatgaaggaaggaacttgaaatccgacttcagacct 240
| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 c---------gtattgcatgttggtatgaaggaaggaacttgaaatccgacttcagacct 618
Query: 241 catgggaagctactaataggaatgtctacctaaggctgtgggattgaaaaacagaaaaat 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 caagggaagctactaataggaatgtctacctaaggctgtgggattgaaaaacagaaaaat 558
Query: 301 ttaagttgtattaagctaccaaaattaggtgtttaccaatgttggtatgagtactttcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ttaagttgtattaagctaccaaaattaggtgtttaccaatgttggtatgagtactttcac 498
Query: 361 aggaaaagtctgaactatcactcactggcttcgttctaggatgttatcataagcttgggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aggaaaagtctgaactatcactcactggcttcgttctaggatgttatcataagcttgggg 438
Query: 421 aactc-tttttttttttttttttttgagacagggtttctctgtg 463
||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 437 aactcttttttttttttttttttttgaaacagggtttctctgtg 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 864
Length adjustment: 10
Effective length of query: 453
Effective length of database: 854
Effective search space: 386862
Effective search space used: 386862
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
