Query= MSMg01no491_b02.b1 MSMg01no491_b02.b1 CHROMAT_FILE:
MSMg01no491_b02.b1 PHD_FILE: MSMg01no491_b02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:51 2005
(625 letters)
>mm_chr14_38129867_38130889
Length = 1023
Score = 690 bits (357), Expect = 0.0
Identities = 382/391 (97%), Gaps = 2/391 (0%)
Strand = Plus / Minus
Query: 15 gaattcctacaaaagaatgaagtacagtgggaaaagaaagaacaagaagatgagccaggg 74
|||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 389 gaattcctacaaaagaatgaagtagagtgggaaaag--agaacgagaagatgagccaggg 332
Query: 75 tgagttcctacatgactagtatatgcttcattagcattgcccacgtctgacaatggtgca 134
|||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 331 tgagttcctacatggctagtatatgcttcattagcattgcccacgtctgacagtggcgca 272
Query: 135 taaatctcagctggacaaagtctggacaagaattcttaccacaggtgtgaaaagtgtttc 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 taaatctcagctggacaaagtctggacaagaattcttaccacaggtgtgaaaagtgtttc 212
Query: 195 tgttcaggaaatattcccctgtgcccatgtgcttgaggctcttcccactttcttttctat 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 tgttcaggaaatattcccctgtgcccatgtgcttgaggctcttcccactttcttttctat 152
Query: 255 tagtttctggttctatgtggaggtccttgatccacttagacttgagttttgtgcaaaggc 314
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 151 tagtttctggttctatgtggaggtccttgatccacttggacttgagttttgtgcaaaggc 92
Query: 315 tgtctcctgagaggcaatgccagtgcctgacaatacagaagtggatgctcacagccattc 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 91 tgtctcctgagaggcaatgccagtgcctgacaatacagaagtggatgctcacagccactc 32
Query: 375 attggactgagcacagggtccccaatggaag 405
|||||||||||||||||||||||||||||||
Sbjct: 31 attggactgagcacagggtccccaatggaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1023
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1013
Effective search space: 622995
Effective search space used: 622995
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no491_b02.g1 MSMg01no491_b02.g1 CHROMAT_FILE:
MSMg01no491_b02.g1 PHD_FILE: MSMg01no491_b02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:51 2005
(547 letters)
>mm_chr14_37906542_37907487
Length = 946
Score = 1009 bits (522), Expect = 0.0
Identities = 537/542 (99%), Gaps = 1/542 (0%)
Strand = Plus / Plus
Query: 6 gaattcttggttctctctgtgtctgatgggctgctcacttgacagaagctatgaaaatga 65
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 206 gaattcttggttctctctgtgtctgatgggctgctcacttgaccgaagctatgaaaatga 265
Query: 66 tgatgatgacctaactgtgaccctagaggaatggaatgctcctgttataggggaatgaaa 125
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 266 tgatgatgacctaactgtgaccctggaggaatggaatgctcctgttataggggaatgaaa 325
Query: 126 aacaggatacagaaagcatgtttttagaatcacaattatgtcaaacaaaaggagtaaaaa 185
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aacaggatacagaaagcatgtctttagaatcacaattatgtcaaacaaaaggagtaaaaa 385
Query: 186 ccacatatagaaaaatactaaaaggaagtacatccaaatttagagaggtctcaaagtaga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ccacatatagaaaaatactaaaaggaagtacatccaaatttagagaggtctcaaagtaga 445
Query: 246 gggctttaaaaaaacacatttaacatttcttcagtaactgtgcatttacaattatagtga 305
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gggctttaaaaaa-cacatttaacatttcttcagtaactgtgcatttacaattatagtga 504
Query: 306 tattagcaagtgggtgtagtgagtaatggacaggtgtgctacactcggggctttgtcccc 365
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 505 tattagcaagtgggtgtagtgagtaatggacaggtgtgctacactcagggctttgtcccc 564
Query: 366 tgcacaagtcacagggcagccttggggtcaggacttggacccacccgggagctttgtccc 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgcacaagtcacagggcagccttggggtcaggacttggacccacccgggagctttgtccc 624
Query: 426 ttccaggggctctctcacttacctctggaacccggatgatgtaaggctcctggatgaacc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttccaggggctctctcacttacctctggaacccggatgatgtaaggctcctggatgaacc 684
Query: 486 tgggtgcttcatcattggcatctgtcaccagtatcacgactttctctgccacctgtgagg 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgggtgcttcatcattggcatctgtcaccagtatcacgactttctctgccacctgtgagg 744
Query: 546 ta 547
||
Sbjct: 745 ta 746
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 946
Length adjustment: 10
Effective length of query: 537
Effective length of database: 936
Effective search space: 502632
Effective search space used: 502632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
