Query= MSMg01no491_n20.b1 MSMg01no491_n20.b1 CHROMAT_FILE:
MSMg01no491_n20.b1 PHD_FILE: MSMg01no491_n20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:54 2005
(639 letters)
>mm_chr14_47683439_47684476
Length = 1038
Score = 1214 bits (628), Expect = 0.0
Identities = 634/636 (99%), Gaps = 1/636 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctgtttctcttgcaaatacttaaaccccaagttagcaatgcctggtctaggta 63
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctgtttctcctg-aaatacttaaaccccaagttagcaatgcctggtctaggta 262
Query: 64 aactttagggcccagtggggttgccaaggttagccctaatctgtgagccatcagttgcta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aactttagggcccagtggggttgccaaggttagccctaatctgtgagccatcagttgcta 322
Query: 124 cctaagttaagtaataactttttctttttttccctctggccatcgcccttccccctctct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cctaagttaagtaataactttttctttttttccctctggccatcgcccttccccctctct 382
Query: 184 gccctcccatctttcatcatcccttcttgcccctttcatttctccttccatctcttgcgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gccctcccatctttcatcatcccttcttgcccctttcatttctccttccatctcttgcgc 442
Query: 244 atcttgcaccatagatgttccagcttggttaaaaagcctccgcctgcacaagtacgctgc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atcttgcaccatagatgttccagcttggttaaaaagcctccgcctgcacaagtacgctgc 502
Query: 304 gctcttctcgcagatgacttatgaggaaatgatggccctcactgagtgtcaactggaggc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gctcttctcgcagatgacttatgaggaaatgatggccctcactgagtgtcaactggaggc 562
Query: 364 tcaggtatgtgcctgaggggccccttccctgagacaaggtcttgaggttcagcatcagac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tcaggtatgtgcctgaggggccccttccctgagacaaggtcttgaggttcagcatcagac 622
Query: 424 agaccttgtcttagatgcagaaacagaccttatccactccatagcttgcccggatctagg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 agaccttgtcttagatgcagaaacagaccttatccactccatagcttgcccggatctagg 682
Query: 484 agctgcctggtgctggctggtgtcccacggtgagtaaactagtttcttgccttggcagtt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 agctgcctggtgctggctggtgtcccacggtgagtaaactagtttcttgccttggcagtt 742
Query: 544 cagtggaagataaagaccagcaggcagtcacgggccaaggcaagggagaggaagttagga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 cagtggaagataaagaccagcaggcagtcacgggccaaggcaagggagaggaagttagga 802
Query: 604 aaagacagagccaagtgtaccttcaaactctgggtg 639
||||||||||||||||||||||||||||||||||||
Sbjct: 803 aaagacagagccaagtgtaccttcaaactctgggtg 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1038
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1028
Effective search space: 646612
Effective search space used: 646612
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no491_n20.g1 MSMg01no491_n20.g1 CHROMAT_FILE:
MSMg01no491_n20.g1 PHD_FILE: MSMg01no491_n20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:54 2005
(640 letters)
>mm_chr14_47846519_47847557
Length = 1039
Score = 1180 bits (610), Expect = 0.0
Identities = 635/648 (97%), Gaps = 9/648 (1%)
Strand = Plus / Minus
Query: 1 cagaccagccaggactacacagagaaacccggtctcataaaaactaaataaaaaccaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 cagaccagccaggactacacagagaaacccggtctcataaaaactaaataaaaaccaacc 645
Query: 61 agttaattaacaattcgttttgaactaaacatgaaggatggtggaggagcacaaattcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 agttaattaacaattcgttttgaactaaacatgaaggatggtggaggagcacaaattcag 585
Query: 121 gttagcgctgacagacatggcccacctgaagagtcaactcttttagtcatggaacgaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gttagcgctgacagacatggcccacctgaagagtcaactcttttagtcatggaacgaaag 525
Query: 181 tcagccacacatcaacagatttcccaactaccttgctaaaagcaccaggcaagtgtgtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tcagccacacatcaacagatttcccaactaccttgctaaaagcaccaggcaagtgtgtta 465
Query: 241 cagcaaggtatattatttctcttctataggtgttacatattgctgtatttatagctttag 300
|||||||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 cagcaaggtagaaca-atctcttctataggtgttacatattgctgtatttatagctttag 406
Query: 301 cttgtggaggctagaggtctttgaaaattattcattattccaatctagagaagccaatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 cttgtggaggctagaggtctttgaaaattattcattattccaatctagagaagccaatct 346
Query: 361 atttgatttgagattgttaggtcacatgcaaaaataaagttaaatggttgttaagaggcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 atttgatttgagattgttaggtcacatgcaaaaataaagttaaatggttgttaagaggcc 286
Query: 421 tacaactacctgagatagtttaggcttctgatttatgacacacacacacacatcatacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tacaactacctgagatagtttaggcttctgatttatgacacacacacacacatcatacca 226
Query: 481 tgcaacataccca--------acacacacacacacacacacacacacacacacacacaca 532
||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tgcaacatacccaacacacacacacacacacacacacacacacacacacacacacacaca 166
Query: 533 cacacaccatgcacacacaaacacaccatgcacacatacactgtgcacacataaacacac 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 cacacaccatgcacacacaaacacaccatgcacacatacactgtgcacacataaacacac 106
Query: 593 catgcatatacacaccatgcacacacacacaaacacacatagagccta 640
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 catgcatatacacaccatgcacacacacacaaacacacatagagccta 58
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 90
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1039
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1029
Effective search space: 648270
Effective search space used: 648270
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
