Query= MSMg01no494_g19.b1 MSMg01no494_g19.b1 CHROMAT_FILE:
MSMg01no494_g19.b1 PHD_FILE: MSMg01no494_g19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:16 2005
(652 letters)
>mm_chr14_59059468_59060519
Length = 1052
Score = 1191 bits (616), Expect = 0.0
Identities = 631/636 (99%)
Strand = Plus / Plus
Query: 17 acagggaggaagtcacctgagctcagataagcccgttcctctgcttccagctctccccag 76
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 217 acagggaggaagtcacctgagctcagataagcccattcctctgcttccagctctccccag 276
Query: 77 atgtgagcaagcagcccaggctcccactgctatcccatcttcaccatgatggacagcacc 136
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 277 atgtgagcaagcagcccaggctcccactgctatcccatcttcaccatgatggacaggacc 336
Query: 137 ttcagtctctgagccaagccaacccttccttccttaagcattctctgtcagcatcacggc 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttcagtctctgagccaagccaacccttccttccttaagcattctctgtcagcatcacggc 396
Query: 197 tctgagaagccacacagaattatatgctgagcttcttcctcacaatcattgctacttatt 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tctgagaagccacacagaattatatgctgagcttcttcctcacaatcattgctacttatt 456
Query: 257 attaaaaaaaatgttgtataaaccccagtcacttaaatgtcacaggcaggatgtgcccat 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 attaaaaaaaatgttgtataaaccccagtcacttaaatgtcacaggcaggatgtgcccat 516
Query: 317 atgttatgcaccacacacagatatttctgatggtttgcaagtagacttttccctcctcac 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 atgttatgcaccacacacagatatttctgatggtttgcaagtagacttttccctcctcac 576
Query: 377 cacggatatcgaagatgtcgaaaatcaacttattctcagttctgtcaattatgttttgct 436
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 catggatatcgaagatgtcgaaaatcaacttattctcagttctgtcaattatgttttgct 636
Query: 437 aagaatccaagaaggtaaagataagaatctgatgactctcatcataaccactttcatcat 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 aagaatccaagaaggtaaagataagaatctgatgactctcatcataaccactttcatcat 696
Query: 497 cttgtgtacatgtaagcagggatggagtgacatgttactgatgactgtgcccagcacacc 556
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 697 cttgtgtacatgtaagcagggatggagtgacgtattactgatgactgtgcccagcacacc 756
Query: 557 agttgtatgtgttacatgtctacatgtttctgctaactgaatgaataggtaggcatgcac 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 agttgtatgtgttacatgtctacatgtttctgctaactgaatgaataggtaggcatgcac 816
Query: 617 tgcactgggaaacccatggagattctaacttcttgt 652
||||||||||||||||||||||||||||||||||||
Sbjct: 817 tgcactgggaaacccatggagattctaacttcttgt 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_g19.g1 MSMg01no494_g19.g1 CHROMAT_FILE:
MSMg01no494_g19.g1 PHD_FILE: MSMg01no494_g19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:16 2005
(641 letters)
>mm_chr14_59242619_59243658
Length = 1040
Score = 837 bits (433), Expect = 0.0
Identities = 466/477 (97%), Gaps = 3/477 (0%)
Strand = Plus / Minus
Query: 1 tgaaatatctgatatttcaatagatgggagtgaatttggggagaaaaaaagccaggagcc 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tgaaatatctgatacttcaatagatgggagtgaatttggggagaaaaaaagccaggagcc 416
Query: 61 attcattcggattatagggttgagagctgtaataaaatgatatttaaagaattgtttcag 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 attcattcagattatagggttgagagctgtaataaaatgatatttaaagaattgtttcag 356
Query: 121 aaaactatattgatagaaagggaagtagcaccatattttaaataagaaatagc-ctccgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 355 aaaactatattgatagaaagggaagtagcaccatattttaaataagaaata-ctctccgt 297
Query: 180 gtctgtagataaggggctgtgctacaaatccccaagtccatatgttcatgtctgagcata 239
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 296 gtctgtagataaggggctgtgctacaaatccccaagtccatacgttcatgtctgagcata 237
Query: 240 tgaccaggtctggaaccatgagtgagaacgcattctatgtcttagttagcatttctcttg 299
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 236 tgaccaggtct-gaaccatgagtgagaatgcattctatgtcttagttagcatttctcttg 178
Query: 300 ctgtgataaaatactatgatcaaaagaaacttggggaggaaagaatttatttcaacttag 359
|||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 177 ctgtgataaaatactacgatcaaaagaaaattggggaggaaagaatttatttcaacttag 118
Query: 360 caagggtttatttcaaccctcaggtcacactctgtcactgaaggaagtcggggaaggaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 caagggtttatttcaaccctcaggtcacactctgtcactgaaggaagtcggggaaggaaa 58
Query: 420 tcaagtcgggaacccagagacgagaactgaagcggaagccatgaagggatgctgctt 476
|||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 57 tcaagtcgggaatccagaggcgagaactgaagcggaagccatgaagggatgctgctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1040
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1030
Effective search space: 649930
Effective search space used: 649930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
