Query= MSMg01no494_l16.b1 MSMg01no494_l16.b1 CHROMAT_FILE:
MSMg01no494_l16.b1 PHD_FILE: MSMg01no494_l16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:38 2005
(697 letters)
>mm_chr14_21518122_21519218
Length = 1097
Score = 1297 bits (671), Expect = 0.0
Identities = 690/697 (98%), Gaps = 3/697 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttctcttacgaacagattgagtagctaatattggcatgatatcagttcagtg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggaattctttctcttacgaacagattgagtagctaatattggcatgatatcagttcagtg 260
Query: 64 tattgccttgttctagggctggaaagcgccattcagtccactacccacattctctcatgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattgccttgttctagggctggaaagcgccattcagtccactacccacattctctcatgt 320
Query: 124 tcttccagataacgtttatggtgcggagtcactggttttgtggttctgggaaggcaagca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttccagataacgtttatggtgcggagtcactggttttgtggttctgggaaggcaagca 380
Query: 184 ttctataaattgaattatagcttcaactctaatactgaggggttttgtgtgtatatgtgg 243
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 ttctataaattgagttatagcttcaactctaatactgaggggttttgtgtatatatgtgg 440
Query: 244 ttttt--gtgtttgttttttaataaagacagcccgaggcccccagttcaaacagattgaa 301
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttttttgtgtttgttttttaataaagacagcccgaggcccccagttcaaacagattgaa 500
Query: 302 gaaagcaagg-atttaagtcacccttaagtgcttagcgaaataaaaactttagatttgag 360
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaagcaagggatttaagtcacccttaagtgcttagcgaaataaaaactttagatttgag 560
Query: 361 gctagagagatggctccactcttaagagcactggctactcttccagacgacccaagtttg 420
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561 gctggagagatggctccactcttaagagcactggctactcttccagaccacccaagtttg 620
Query: 421 attcctagcatccacatagagctgacaactgtctgtaacttcagatgcaagggtattaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attcctagcatccacatagagctgacaactgtctgtaacttcagatgcaagggtattaca 680
Query: 481 tatatatattcaatcaaaactcccatataaatccacacaaccaaaagtgtaggtttgaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tatatatattcaatcaaaactcccatataaatccacacaaccaaaagtgtaggtttgaag 740
Query: 541 atatagatgaactgcctactgcttaccaggagctttttctggggcgatcagaaagaatgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atatagatgaactgcctactgcttaccaggagctttttctggggcgatcagaaagaatgc 800
Query: 601 cttaggccttagagctatgcttattgtattgatgaattatcacttgagaagtctcttggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cttaggccttagagctatgcttattgtattgatgaattatcacttgagaagtctcttggt 860
Query: 661 ttatcagtgcatctgattgcaaactacagatatctct 697
|||||||||||||||||||||||||||||||||||||
Sbjct: 861 ttatcagtgcatctgattgcaaactacagatatctct 897
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1097
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1087
Effective search space: 746769
Effective search space used: 746769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_l16.g1 MSMg01no494_l16.g1 CHROMAT_FILE:
MSMg01no494_l16.g1 PHD_FILE: MSMg01no494_l16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:38 2005
(658 letters)
>mm_chr14_21564699_21565756
Length = 1058
Score = 1265 bits (654), Expect = 0.0
Identities = 657/658 (99%)
Strand = Plus / Minus
Query: 1 caccccaaaggccaggtgctcgtgctcatttccttccccctcttcacatcaggcttgggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 caccccaaaggccaggtgctcgtgctcatttccttccccctcttcacatcaggcttgggc 799
Query: 61 tgttgtcttgagaggggaaggaaatgcaggtgtcggggaaagggcaacaggggagccaga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 798 tgttgtcttgagaggggaaggaaatgcaggtgtcggggaaagggcaacaggggagccaaa 739
Query: 121 gttcccagtttttattctgctttaagtcaccatctttcccacctgtaatgtggggaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gttcccagtttttattctgctttaagtcaccatctttcccacctgtaatgtggggaaaaa 679
Query: 181 atcctgaatttctttgcatctggtgtgactctgtagtgacgtggcacctggagtaagcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 atcctgaatttctttgcatctggtgtgactctgtagtgacgtggcacctggagtaagcag 619
Query: 241 aaatttctgaagagatgcttcggccagtcctgcagggaggatgccttcagagctaggtct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aaatttctgaagagatgcttcggccagtcctgcagggaggatgccttcagagctaggtct 559
Query: 301 ctgaggctccccaaattgtccatctctctaaccattgctcccacccacacagtgttacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ctgaggctccccaaattgtccatctctctaaccattgctcccacccacacagtgttacag 499
Query: 361 ttgccacctcaggcctggcacctccgcgccagactggggacaagggaggtctgggagtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ttgccacctcaggcctggcacctccgcgccagactggggacaagggaggtctgggagtca 439
Query: 421 aacctgagcaattttggtgactctagagaactaaatcatgttttcttgtctcagccacag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aacctgagcaattttggtgactctagagaactaaatcatgttttcttgtctcagccacag 379
Query: 481 agcaacaacaaaaacagtctcgtaagcccagcccaagagcctgcgcccttgcagacggcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 agcaacaacaaaaacagtctcgtaagcccagcccaagagcctgcgcccttgcagacggcc 319
Query: 541 atggtacctctgactacggcttctccgcctctgcccctggctgcctcctgccccctttct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atggtacctctgactacggcttctccgcctctgcccctggctgcctcctgccccctttct 259
Query: 601 cctcctcttcttgtcttaccttcttgggctcctcagctttgtcatttccccatagggc 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cctcctcttcttgtcttaccttcttgggctcctcagctttgtcatttccccatagggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
