Query= MSMg01no495_e24.b1 MSMg01no495_e24.b1 CHROMAT_FILE:
MSMg01no495_e24.b1 PHD_FILE: MSMg01no495_e24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:22 2005
(457 letters)
>mm_chr14_112156935_112157792
Length = 858
Score = 870 bits (450), Expect = 0.0
Identities = 453/454 (99%), Gaps = 1/454 (0%)
Strand = Plus / Minus
Query: 5 gaattcaagtgatcttgctctagatcctgggtaatatcaattccattgttgcaaccatcg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gaattcaagtgatcttgctctagatcctgggtaatatcaattccattgttgcaaccatcg 599
Query: 65 atcagccttgtcacttttcctgatatacatgccttgagaaggtggggtagttatggctgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 atcagccttgtcacttttcctgatatacatgccttgagaaggtggggtagttatggctgc 539
Query: 125 cttgggaaataacccaaatgtttacaacacatgtgaatatctatcttg-aaaaaaaatac 183
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 538 cttgggaaataacccaaatgtttacaacacatgtgaatatctatcttgaaaaaaaaatac 479
Query: 184 caaacaaatacacagtggagcctttgtgtaaaagcaaaatcaatgaggttatgttgggtt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 caaacaaatacacagtggagcctttgtgtaaaagcaaaatcaatgaggttatgttgggtt 419
Query: 244 tcactgtatgttgtagcttctggtgtattgttctgagaacaaaagcatactttacaactg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tcactgtatgttgtagcttctggtgtattgttctgagaacaaaagcatactttacaactg 359
Query: 304 agtaaacaaaacctgaaagtacttcaaatgataaaataagtattaaagtgataagtatat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 agtaaacaaaacctgaaagtacttcaaatgataaaataagtattaaagtgataagtatat 299
Query: 364 gctatactttgcttgaacctgttatttgtagagagaacagaaacctttcctaatggactt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gctatactttgcttgaacctgttatttgtagagagaacagaaacctttcctaatggactt 239
Query: 424 gactatggagtatatatttagtgttcttgtttcc 457
||||||||||||||||||||||||||||||||||
Sbjct: 238 gactatggagtatatatttagtgttcttgtttcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 858
Length adjustment: 10
Effective length of query: 447
Effective length of database: 848
Effective search space: 379056
Effective search space used: 379056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_e24.g1 MSMg01no495_e24.g1 CHROMAT_FILE:
MSMg01no495_e24.g1 PHD_FILE: MSMg01no495_e24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:22 2005
(622 letters)
>mm_chr14_112018534_112019556
Length = 1023
Score = 1120 bits (579), Expect = 0.0
Identities = 612/623 (98%), Gaps = 1/623 (0%)
Strand = Plus / Plus
Query: 1 atagtgaaggtaactgtaggttgcaaagcaaataacccaggtcttacttgatctcagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 atagtgaaggtaactgtaggttgcaaagcaaataacccaggtcttacttgacctcagaga 260
Query: 61 acagaaggaaaaactatgtacccaaattattcaatttt-cattcaattttatttctcttc 119
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 acagaaggaaaaactatgtacccaaattattcaatttttcattcaattttatttctcttc 320
Query: 120 aatttgagaatatggttaagttctaaagtcaatagaatgtgatagaagtgatacaccagt 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 aatttgagaatatggttaagttctaaagtcaatagaatgtgatagaagtgatacgccagt 380
Query: 180 gtccccaatgtatctaacggcaccttatcatttccacgttttattattgggatgcttact 239
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 gtccccaatgtatctaacggcaccttatcatttccacattttattattgggatgcttact 440
Query: 240 ttaaacctagttaccaaacaataaacacatatgtaggtcagtgaagctatgtttcattaa 299
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaaacctagttaccaaaaaataaacacatatgtaggtcagtgaagctatgtttcattaa 500
Query: 300 attgacatgcatagcaataaagatgcttctcaattgctgattaatttttgcatatatcat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attgacatgcatagcaataaagatgcttctcaattgctgattaatttttgcatatatcat 560
Query: 360 atgtatatctactctggatcatcccattcccaggtccagggattatataacaaacatgaa 419
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgtatatctactctgggtcgtcccattcccaggtccagggattatataacaaacatgaa 620
Query: 420 gctttcttgcctcaggttagaaacagacactatgaaccaatcactgctctttcatggttg 479
|||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 621 gctttcttgccttaggttagagacagacactattaaccaatcactgctctttcatggttg 680
Query: 480 aaatctcagagtggtcttgcacgtagctaaaactctaattgcgtgttctttcccttctta 539
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaatctcagagtggtcttgcatgtagctaaaactctaattgcgtgttctttcccttctta 740
Query: 540 caaccattcaaagatttctcaatgagttctaaagcaaacacagacccacatttattacca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caaccattcaaagatttctcaatgagttctaaagcaaacacagacccacatttattacca 800
Query: 600 atactgaatctctcttgacttga 622
|||||||||||||||||||||||
Sbjct: 801 atactgaatctctcttgacttga 823
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1023
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1013
Effective search space: 619956
Effective search space used: 619956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
