Query= MSMg01no495_f04.b1 MSMg01no495_f04.b1 CHROMAT_FILE:
MSMg01no495_f04.b1 PHD_FILE: MSMg01no495_f04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:23 2005
(689 letters)
>mm_chr14_109370710_109371798
Length = 1089
Score = 1247 bits (645), Expect = 0.0
Identities = 675/685 (98%), Gaps = 1/685 (0%)
Strand = Plus / Plus
Query: 5 gaattctaaactgaaaagtttcaaagaagatattagaagaccaggtactggagaaacaga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctaaactgaaaagtttcaaagaagatattagaagaccaggtactggagaaacaga 263
Query: 65 taaatgtatgtaggtgttggaatcaaaagtccccacttttgattgtctggaagaacaaca 124
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tagatgtatgtaggtgttggaatcaaaagtccccacttttgattgtctggaagaacaaca 323
Query: 125 gtgctcttaaa-actaaattaactcttcaatccttatagttcacttttgtctatcataat 183
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtgctcttaactactaaattaactcttcaatccttatagttcacttttgtctatcataat 383
Query: 184 atgggatatatgcataaaatatttcataatttaaaaattggacatctatatcaacatagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atgggatatatgcataaaatatttcataatttaaaaattggacatctatatcaacatagt 443
Query: 244 ctttctattaattatggtggctggtcaagtatcatttggaatcatgaattcattatgttt 303
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 444 ctttctattaattatggtggctggtcaagtatcatttggaatcgtgaattcattatgttt 503
Query: 304 actaacatccatgaccttcctgttaattgcagccttggagtccatgtattctctgcctgt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 actaacatccatgaccttcctgttaattgcagccttggagtccatgtattctctgcctgt 563
Query: 364 tatattatcttatttgtaagggttctggtagttacagagtatagaattacctttgtcaca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tatattatcttatttgtaagggttctggtagttacagagtatagaattacctttgtcaca 623
Query: 424 atctattagtcagaatctatagatagttaagctgccttacaaatttacttagcatatatg 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atctattagtcagaatctatagatagttaagctgccttacaaatttacttagcatatatt 683
Query: 484 agatcctctgttccattctaccaccataagaggggaaacaataaacaaaaaaacacaacc 543
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agatcctctgttccgttctaccaccataagaggggaaacaataaacaaaaaaacacaacc 743
Query: 544 aatatttctatttgtcaaaacaaaactcaggtctaggctatatgtaatcacagaggagta 603
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aatatgtctatttgtcaaaacaaaactcaggtctaggctatatgtaatcacagaggagta 803
Query: 604 atagtctcatgttttcattagaaaatttgaaaaaacttattatcatatttaatatacaca 663
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 804 atagtctcatgttttcattagaaaatttgaacaaacttattatcatctttaatatacaca 863
Query: 664 aattagcaacagaatcaaaatgtat 688
||||||||||||||||||||||||
Sbjct: 864 gattagcaacagaatcaaaatgtat 888
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1089
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1079
Effective search space: 732641
Effective search space used: 732641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_f04.g1 MSMg01no495_f04.g1 CHROMAT_FILE:
MSMg01no495_f04.g1 PHD_FILE: MSMg01no495_f04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:23 2005
(554 letters)
>mm_chr14_109503976_109504929
Length = 954
Score = 1040 bits (538), Expect = 0.0
Identities = 550/554 (99%)
Strand = Plus / Minus
Query: 1 aactattgcctcccatgtctataataaactaatgcttacactttcatcagagatagcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 aactattgcctcccatgtctataataaactaatgcttacactttcatcagagatagcata 695
Query: 61 gtaaacattagatagtatatgggtacacagcatctagtcaggagtgacaaaataatatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 gtaaacattagatagtatatgggtacacagcatctagtcaggagtgacaaaataatatgg 635
Query: 121 agctacagagttatttgtgaaaaaaacacaagtgttttgctcttcaacctaccaattcac 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 634 agctacagagttatttgtgacaaaaacacaagtgttttgctcttcaacctaccaattcac 575
Query: 181 atatgtaatagaaatatattatgttctcatggtatatttaatattttgtaaatttatact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 atatgtaatagaaatatattatgttctcatggtatatttaatattttgtaaatttatact 515
Query: 241 gcattccctttaaaacagtgtatatatttatgctggaacaacattttcattggtttgcac 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gcattccctttaaaacagtgcatatatttatgctggaacaacattttcattggtttgcac 455
Query: 301 aagacattgtgtagttcccagaacacgattgccagttcacacctgtcattactaccattt 360
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 454 aggacattgtgtagttcccagaacacgattgccagttcacacctgtcattagtaccattt 395
Query: 361 ccagacaatcttaaaccttctgaggttcataatcaccacacaggaatttgacacacatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ccagacaatcttaaaccttctgaggttcataatcaccacacaggaatttgacacacatat 335
Query: 421 atccatataggctgaatgcaaatacaaagtaaaaaatagatagataaattgatgatagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 atccatataggctgaatgcaaatacaaagtaaaaaatagatagataaattgatgatagat 275
Query: 481 acatgatatataaaagttgtttatgtattgctgaagtaataaaagatgaacttcaccttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 acatgatatataaaagttgtttatgtattgctgaagtaataaaagatgaacttcaccttt 215
Query: 541 atgtttttacagat 554
||||||||||||||
Sbjct: 214 atgtttttacagat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
