Query= MSMg01no496_c09.b1 MSMg01no496_c09.b1 CHROMAT_FILE:
MSMg01no496_c09.b1 PHD_FILE: MSMg01no496_c09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:23 2005
(682 letters)
>mm_chr14_80757189_80758269
Length = 1081
Score = 1137 bits (588), Expect = 0.0
Identities = 624/644 (96%), Gaps = 14/644 (2%)
Strand = Plus / Minus
Query: 39 ttctaggcagaatgttgctttataaatggaagtttgaattcaataaagagggataaaaat 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttctaggcagaatgttgctttataaatggaagtttgaattcaataaagagggataaaaat 1022
Query: 99 cttcttttactaccttagaagagtgaaaacgatacacaaatccttgtcccaggtgacttt 158
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 1021 cttcttttactaccttagaagagttaaaatgatacacaaatccttgtcccaggtgacttt 962
Query: 159 ggcaagtctgttagtccttatgataaacacttccaataacttttctgaaaatttattgtt 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ggcaagtctgttagtccttatgataaacacttccaataacttttctgaaaatttattgtt 902
Query: 219 atcagctaaaggcatcaaacatttggagtgttttatcaaacatttggagtgttcacaaga 278
| |||||||||| || ||| |||||||||||||||||||||||||||
Sbjct: 901 aacagctaaagggatggaac-------------tatcaaacatttggagtgttcacaaga 855
Query: 279 agtggtcaggctatcctctgaataacagaatgttttctctgattgttcttcctagatgcc 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 agtggtcaggctatcctctgaataacagaatgttttctctgattgttcttcctagatgcc 795
Query: 339 atcctaagattatgagtggattatagcatgtatgttttaactcaacttgaccaccattca 398
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 794 atcctaagattatgagtggattata-catgtatgttttaactcaacttgaccaccattca 736
Query: 399 tgagcatctaaagggcttttacaaatacaataaaatttgagctaaaatcccatgaaaact 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tgagcatctaaagggcttttacaaatacaataaaatttgagctaaaatcccatgaaaact 676
Query: 459 cagataagaagaaattgcctatcttcgaatcctctttggagaatgtttttagagaatttg 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 cagataagaagaaattgcctatcttcgaatcctctttggagaatgtttttagagaatttg 616
Query: 519 aaaagggacattgatggattcctgcagacaaaagtttaagaagtaataatatctgagctg 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aaaagggacattgatggattcctgcagacaaaagtttaagaagtaataatatctgagctg 556
Query: 579 ggcagaaagaaaacgaaagatgctgaagtgttctcagtgtgttttgctgatactttaact 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ggcagaaagaaaacgaaagatgctgaagtgttctcagtgtgttttgctgatactttaact 496
Query: 639 tctacacttcagtaattggattgggatttcattacaagaagttt 682
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tctacacttcagtaattggattgggatttcattacaagaagttt 452
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1081
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1071
Effective search space: 719712
Effective search space used: 719712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no496_c09.g1 MSMg01no496_c09.g1 CHROMAT_FILE:
MSMg01no496_c09.g1 PHD_FILE: MSMg01no496_c09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:23 2005
(683 letters)
>mm_chr14_80597483_80598565
Length = 1083
Score = 1189 bits (615), Expect = 0.0
Identities = 665/683 (97%), Gaps = 3/683 (0%)
Strand = Plus / Plus
Query: 1 cctttaagtttatggctaaggtctggctatacacatgtgtatggtcaaaagccagaatag 60
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 201 cctttaagtttatggctaaggtctggctatacacatgtgtagggtcaagagccagaatag 260
Query: 61 agacatcagaggcaaaacattaccgaagaatgctggggtactgacccatcgtgacaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 agacatcagaggcaaaacattaccgaagaatgctggggtactgacccattgtgacaagag 320
Query: 121 agtccttgctagtaccataagcattaatccaaggatctacaaagattacacaatatatta 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |
Sbjct: 321 agtccttgctagtaccgtaagcattaatccaaggatctacaaagattacacaatagaaga 380
Query: 181 ctatatcttatagtgagacctgctaaattctaacactgataatgccaaagaaatgaagaa 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctatatcttacagtgagacctgctaaattctaacactgataatgccaaagaaatgaagaa 440
Query: 241 tgttaataattgataggagtaacagggctcggagcttcagcccacagcttaaaacctatg 300
|| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggaaaaaattgataggagtaacagggctcggagcttcagcccacagcttaaaacctatg 500
Query: 301 ctgacatgttcagatttaatagccagtaattacattgttgccaaggacatgaggaaagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgacatgttcagatttaatagccagtaattacattgttgccaaggacatgaggaaagaa 560
Query: 361 ttataaataacatcttttgctaacagaaatgccaaggcatcatttttttttcctttttta 420
||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||
Sbjct: 561 ttataaataacatcttttgctaacagaaatgccaaagcatcattgtttt---ctttttta 617
Query: 421 gcaaatcaaagccagatatattataatgaaggtaggaaatacattatgaccagatggggt 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 618 gcaaatcaaagccagatatattataaagaaggtaggaaatacattatgaccagatggggt 677
Query: 481 tgatcttaaatctacaagaatgacttaacacctataaaccatgaaattaatctctctaac 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tgatcttaaatctacaagaatgacttaacacctataaaccatgaaattaatctctctaat 737
Query: 541 aaaggagaaatgcatgtaatgatgtcaatggatgcagagaaaaattggcaatatttaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 aaaggagaaatgcatgtaatgatgtcaatggatgcagagaaaaattggcaatatttaatg 797
Query: 601 cttgcatatggtaaaatttctcagaaaattaggaatagaaaaactttacaaattaataga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 cttgcatatggtaaaatttctcagaaaattaggaatagaaaaactttacaaattaataga 857
Query: 661 gtattatatattatataactata 683
|||||||||||||||||||||||
Sbjct: 858 gtattatatattatataactata 880
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space: 722129
Effective search space used: 722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
