Query= MSMg01no496_j22.b1 MSMg01no496_j22.b1 CHROMAT_FILE:
MSMg01no496_j22.b1 PHD_FILE: MSMg01no496_j22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:00 2005
(633 letters)
>mm_chr14_47318903_47319935
Length = 1033
Score = 1168 bits (604), Expect = 0.0
Identities = 627/644 (97%), Gaps = 15/644 (2%)
Strand = Plus / Plus
Query: 5 gaattcactaattcctcagcaaacactgtcaactgcccacccacccctgcctctgcttat 64
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gaattcactaagacctcagcaaacactgtcaactgcccacccacccctgcctctgcttat 249
Query: 65 cacttctgtttgttttgtgttgtgttt---------------gaacccctggtcttaggc 109
||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 250 cacttctgtttgttttgtgttgtgttttcactacttggaattgaacccctggtcttaggc 309
Query: 110 aggtgagcattctaacattgagctgcctctcctgctaacttggttttttttttttttaag 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aggtgagcattctaacattgagctgcctctcctgctaacttggttttttttttttttaag 369
Query: 170 gccatggcatataccagtctgcccttactttgttccctggtgtcctaaccactgtgactg 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gccatggcatataccagtctgcccttactttgttccctggtgtcctaaccactgtgactg 429
Query: 230 atgtctgacccacccaatccatcaactcatgtgctccgtgtcagtcagtgttccattact 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 atgtctgacccacccaatccatcaactcatgtgctccgtgtcagtcagtgttccattact 489
Query: 290 atgacgaaggacctgagaacgttgacttaacagaaatagatgtagcctggcttataggtt 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 atgacgaaggacctgagaacgttgacttaacagaaatagatgtagcctggcttataggtt 549
Query: 350 cgaaggtttgagttcagggtctgcagactccaatatttccatatgtgtaaatgatgcaga 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 cgaaggtttgagttcagggtctgcagactccaatatttccatatgtgtaaatgatgcaga 609
Query: 410 acatcgtagaagaaatatgtgtgcaacacagctgctgatcagctacgtctcaatggccag 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 acatcgtagaagaaatatgtgtgcaacacagctgctgatcagctacgtctcaatggccag 669
Query: 470 gatgcagagagggagagaacaagagagatccagagacaagacctacccttctggggggtg 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gatgcagagagggagagaacaagagagatccagagacaagacctacccttctggggggtg 729
Query: 530 ttcccggaggacacctacttcctccaatgagacctagaattccaaagtttccagtatctt 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ttcccggaggacacctacttcctccaatgagacctagaattccaaagtttccagtatctt 789
Query: 590 ccaatcatgccagaaaattatgacttcattaatggattaaccca 633
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ccaatcatgccagaaaattatgacttcattaatggattaaccca 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no496_j22.g1 MSMg01no496_j22.g1 CHROMAT_FILE:
MSMg01no496_j22.g1 PHD_FILE: MSMg01no496_j22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:00 2005
(553 letters)
>mm_chr14_47501588_47502540
Length = 953
Score = 1069 bits (553), Expect = 0.0
Identities = 553/553 (100%)
Strand = Plus / Minus
Query: 1 ctctcggctgccacccgcgtgttctacaacggccagggcaccggagcctccggagctggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ctctcggctgccacccgcgtgttctacaacggccagggcaccggagcctccggagctggg 694
Query: 61 acaggagtgaatcccaacggagctggactggagcgagaacggtgctgccacccgccgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 acaggagtgaatcccaacggagctggactggagcgagaacggtgctgccacccgccgctc 634
Query: 121 gcccttgggaatgtggctccccaggtccagtgaccctttggcctgggacctgtgggtggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gcccttgggaatgtggctccccaggtccagtgaccctttggcctgggacctgtgggtggc 574
Query: 181 tgactggtcccgtgggtgactgactggtgtagaccgtaaacacccggagtcactgtctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tgactggtcccgtgggtgactgactggtgtagaccgtaaacacccggagtcactgtctct 514
Query: 241 gggggcttggacggattcctggggtctgggacgcatgaagtagcagagggcggcgaaggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gggggcttggacggattcctggggtctgggacgcatgaagtagcagagggcggcgaaggg 454
Query: 301 cacaacgcgcagggctagatgtgtctggccgcggtgctccacgaggcccttgtctaggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cacaacgcgcagggctagatgtgtctggccgcggtgctccacgaggcccttgtctaggag 394
Query: 361 aagcaagcagagcctggtcgatcaccctcagcccaagtccggcgctggatgccctttatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 aagcaagcagagcctggtcgatcaccctcagcccaagtccggcgctggatgccctttatt 334
Query: 421 tttgcagtcctccatacccgcctcaggcctcgctttcccgagaggaggaggcggacttcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tttgcagtcctccatacccgcctcaggcctcgctttcccgagaggaggaggcggacttcg 274
Query: 481 ggagcctgatctcaagctatgcttggcgcgcggctgtggcttgtggcctggagctgtggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ggagcctgatctcaagctatgcttggcgcgcggctgtggcttgtggcctggagctgtggc 214
Query: 541 cccaggcgccctg 553
|||||||||||||
Sbjct: 213 cccaggcgccctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
