Query= MSMg01no497_o13.b1 MSMg01no497_o13.b1 CHROMAT_FILE:
MSMg01no497_o13.b1 PHD_FILE: MSMg01no497_o13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:45 2005
(320 letters)
>mm_chr14_118883539_118884254
Length = 716
Score = 538 bits (278), Expect = e-157
Identities = 308/320 (96%), Gaps = 4/320 (1%)
Strand = Plus / Minus
Query: 1 tgtgctcattttatgcacgaaaatgagaaacttcagtacagatgcccgatcgcctggcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tgtgctcattttatgcacgaaaatgagaaacttcagtacagatgcccgatcgcctggcct 457
Query: 61 ctttgtcattcccccccccccttcctgtttttaaaccatctctgggttttgagtcagtga 120
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 456 ctttgtcat----ccccccccttcctgtttttaaattatctctgggttttgagtcagtga 401
Query: 121 aatgattttgcttatcagtttagtggcgtgataatgcatatctgtgaatcaaagtgatca 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 400 aatgattttgcttatcagtttagtggcgtgataaagcatatctgtgaatcaaagtgatca 341
Query: 181 aaagtaaagtggatctccaagttgttgggcattcagcaccgccgtgcggagggttttggc 240
|||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 340 gaagtaaagtggatctccaagttgttgggcattcagcaccgccatgcagagggttttggc 281
Query: 241 tggcatttaacagcttgtgtgcttgcctggacttctaactgttcctcaatgagccctgtg 300
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 280 tggcatttaacagcttttgtgcttgcctgggcttctaactgttcctcaatgagccctgtg 221
Query: 301 atttcctggatggagacaga 320
||||||||||||||||||||
Sbjct: 220 atttcctggatggagacaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 716
Length adjustment: 9
Effective length of query: 311
Effective length of database: 707
Effective search space: 219877
Effective search space used: 219877
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_o13.g1 MSMg01no497_o13.g1 CHROMAT_FILE:
MSMg01no497_o13.g1 PHD_FILE: MSMg01no497_o13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:45 2005
(565 letters)
>mm_chr14_118709909_118710875
Length = 967
Score = 895 bits (463), Expect = 0.0
Identities = 540/570 (94%), Gaps = 10/570 (1%)
Strand = Plus / Plus
Query: 1 gacctctacaggttcttgctgggctgctgttgtagatggcaccgctccactacagaacaa 60
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 201 gacctctacaggttcttgctgggctgctgttgtagatggcacagccccactacagaacaa 260
Query: 61 aagagcaaatagcccaggcctggggctgttcctctacccgtgcacacactgagcaacacc 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 aagagcaaatagcccaggcctggggctgttcctctacccgtgcacactctgagcaacacc 320
Query: 121 catgtgcaaacatctccactctgtaccattgcacccaatgctgtaagtttttttgtaata 180
|||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 catgtgcaaacatctccactttgtaccattgcacccaatgctgtaagtttggttgtaata 380
Query: 181 tagtttttcttctttgcaggcaggaggtccacacgttaagttcccctcccgtatttttca 240
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 381 tagtttttcttctttgcgggcaggaggtccacacgataagttcccctcccgtattttgc- 439
Query: 241 ta--nttgtccttctttctgcttcactggagtagtagtag----atttctatgaatgaat 294
|| ||||||||||||||||||||||||||||||||||| | || |||||||||
Sbjct: 440 taactttgtccttctttctgcttcactggagtagtagtagcagca---ctgtgaatgaat 496
Query: 295 aagaccacatccgttgtctctgtctttagagacaaccaagaaccaccaaatgtgggaagt 354
||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 497 aagaccacatccgctgtctctgtctttagagacaaccaagaagcaggaaatgtgggaagt 556
Query: 355 caggtgaccctgcagccaggtgggactaagaacacgtgggaagaaagagaagagaagaaa 414
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 557 caggtgaccctgcagccaggtgggactaagaacacgcgggaagaaagagaagagaagaaa 616
Query: 415 gtaggagggtcaggaatgtcgggagatactcatgatctcagcacttgggattcggagaca 474
|||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||
Sbjct: 617 gtaggagggtcaggaatgtcggaagacactcgtgatctcagcacttgggattcggagaca 676
Query: 475 ggaggtttgggactacacagtgaggacgtctcaaggatgaaatcaaaactaaaaagagaa 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ggaggtttgggactacacagtgaggacgtctcaaggatgaaatcaaaactaaaaagagaa 736
Query: 535 agcaagcactgtttgaggtataagtacaga 564
|||||||||||||||||||||||| |||||
Sbjct: 737 agcaagcactgtttgaggtataagaacaga 766
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 967
Length adjustment: 10
Effective length of query: 555
Effective length of database: 957
Effective search space: 531135
Effective search space used: 531135
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
