Query= MSMg01no498_p10.b1 MSMg01no498_p10.b1 CHROMAT_FILE:
MSMg01no498_p10.b1 PHD_FILE: MSMg01no498_p10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:13 2005
(612 letters)
>mm_chr14_116964890_116965899
Length = 1010
Score = 930 bits (481), Expect = 0.0
Identities = 494/499 (98%), Gaps = 2/499 (0%)
Strand = Plus / Minus
Query: 20 ctggaaataaatctgagatgcagtctctgctacagcattggaatagtgagttctaacact 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 497 ctggaaataaatctgagatgcagtctctgctacagcattggaatagtgagttcta--act 440
Query: 80 ttttactaaaactagagttggatagagaaagtttatttatatttcaaaatacatttattc 139
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 439 ttttactaaaactagagttggatagagagagtttatttatatttcaaaatacatttattc 380
Query: 140 ttattgataaaatgtaatttaaagttagccctggagcattttaaagtaaactaaaaggaa 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttattgataaaatgtaatttaaagttagccctggagcattttaaagtaaactaaaaggaa 320
Query: 200 gtgctgaaaatttattggcatataagtaggtttgaccacattgctgacctaatatatagg 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gtgctgaaaatttattggcatataagtaggtttgaccacattgctgacctaatatatagg 260
Query: 260 acagttcacaacacaggtcttaaggctgtggtaatagttttgcctaaacatcaacacctg 319
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 259 acagttcacaacacaggtcagaaggctgtggtaatagttttgcctaaacatcaacacctg 200
Query: 320 ggagacaaaggcaggaggaatgttaataaggcatcctggactattacacaagttccagac 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ggagacaaaggcaggaggaatgttaataaggcatcctggactattacacaagttccagac 140
Query: 380 cagtctgaaaattatactgagtatgtatatatatgaatgactggcgatatcattcagtgg 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 cagtctgaaaattatactgagtatgtatatatatgaatgactggcgatatcattcagtgg 80
Query: 440 tagaacactgaactcagtgttcatgagttcaacattctaatgctaagaaaatcaatcaaa 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 tagaacactgaactcagtgttcatgagttcaacattctaatgctaagaaaatcaatcaaa 20
Query: 500 caaaaataatatcaaacaa 518
|||||||||||||||||||
Sbjct: 19 caaaaataatatcaaacaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1010
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1000
Effective search space: 602000
Effective search space used: 602000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no498_p10.g1 MSMg01no498_p10.g1 CHROMAT_FILE:
MSMg01no498_p10.g1 PHD_FILE: MSMg01no498_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:13 2005
(329 letters)
>mm_chr14_116800940_116801668
Length = 729
Score = 629 bits (325), Expect = 0.0
Identities = 328/329 (99%)
Strand = Plus / Plus
Query: 1 gctatgaactgagtaatgttatttgtttgtggtagtgtcctacagctgcagtgttttata 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 gctatgaactgagtaatgttatttgtttgtggtagtgtcctgcagctgcagtgttttata 260
Query: 61 cagcacagtgggagacaaacaagacagctctttaatcagcttcactactaaatgcagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagcacagtgggagacaaacaagacagctctttaatcagcttcactactaaatgcagcag 320
Query: 121 aaccattttaggaagcaatggcatttcacaaaaaaagagaatgcaaaacataaagtgtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaccattttaggaagcaatggcatttcacaaaaaaagagaatgcaaaacataaagtgtta 380
Query: 181 ttttccacagataactagaaaggaagtggggaagaaagcagaactgttcaaatagagact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttccacagataactagaaaggaagtggggaagaaagcagaactgttcaaatagagact 440
Query: 241 gataaataaagacttcttggcatttaagtcactgaagaacaagtccttggagctggttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gataaataaagacttcttggcatttaagtcactgaagaacaagtccttggagctggttct 500
Query: 301 tgattcaagtgcagcaattggaatcaatt 329
|||||||||||||||||||||||||||||
Sbjct: 501 tgattcaagtgcagcaattggaatcaatt 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
