Query= MSMg01no499_h05.b1 MSMg01no499_h05.b1 CHROMAT_FILE:
MSMg01no499_h05.b1 PHD_FILE: MSMg01no499_h05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:50 2005
(579 letters)
>mm_chr14_101042784_101043759
Length = 976
Score = 1023 bits (529), Expect = 0.0
Identities = 563/579 (97%), Gaps = 10/579 (1%)
Strand = Plus / Minus
Query: 5 gaattctcaactg----atttcaccaaatggctgaggagcaaattctttatcagatagaa 60
||||||||||||| || ||||||||||||||||||||||||||||| ||||||||
Sbjct: 795 gaattctcaactgaggaat---accaaatggctgaggagcaaattctttataagatagaa 739
Query: 61 atagtcaacttaaattttgatgactagaagacagccctagtacaagggtggctctaatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 atagtcaacttaaattttgatgactagaagacagccctagtacaagggtggctctaatgg 679
Query: 121 aagcacacaaagaggaatgtatagccaaacataattttcctctgctgttctgtaatgact 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 678 aagcacacaaagaggaatgtatagccaaacataattttcctctgctgtgctgtaatgact 619
Query: 181 ggagttagctgtgtgcagcaacaagatcgttaatccttatctctgggtgaatacatggaa 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ggagtaagctgtgtgcagcaacaagatcgttaatccttatctctgggtgaatacatggaa 559
Query: 241 catagatcgcatcttccctgccagccctcctcaggcatatatcaagagtgatgtcttcaa 300
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 558 catagatcgcatcttccctgtcagccctcctcaggcatatagcaagagtgatgtcttcaa 499
Query: 301 tattatgtatgtcctaattcgttctggtaagtttcttgtaatccaagaaccactgtgtac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tattatgtatgtcctaattcgttctggtaagtttcttgtaatccaagaaccactgtgtac 439
Query: 361 aatcttctttcaaagaagagaaataactaggagatgttgaaaaggctaacaaaatgcaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aatcttctttcaaagaagagaaataactaggagatgttgaaaaggctaacaaaatgcaca 379
Query: 421 aacaggacaacaagactaaacaaaaaccacagaacatagtgactctagggccacaataca 480
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aacagg---acaagactaaacaaaaaccacagaacatagtgactctagggccacaataca 322
Query: 481 cagacatctactcaaaatggccctgtagctcatagcagtaattgatttgcatgcttcagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagacatctactcaaaatggccctgtagctcatagcagtaattgatttgcatgcttcagt 262
Query: 541 gtcatgaaatgtggaagaaagccttatacactgctgtgg 579
|||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 gtcatgaaatgtggaagacagccttatacactgctgtgg 223
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 976
Length adjustment: 10
Effective length of query: 569
Effective length of database: 966
Effective search space: 549654
Effective search space used: 549654
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no499_h05.g1 MSMg01no499_h05.g1 CHROMAT_FILE:
MSMg01no499_h05.g1 PHD_FILE: MSMg01no499_h05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:50 2005
(596 letters)
>mm_chr14_100887077_100888072
Length = 996
Score = 1033 bits (534), Expect = 0.0
Identities = 580/598 (96%), Gaps = 9/598 (1%)
Strand = Plus / Plus
Query: 1 tcactttgttggtcaactgtccttctggatgctgctgtggaagaatttctgatgagattt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tcactttgttggtcaactgtccttctggatgctgctgtggaagaatttctgatgagatt- 260
Query: 61 gacatatccagcagcagggtttgaatacagattaccctctatgatggagttaggccttat 120
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 261 gacatatccagcagcagggtttgaatacaggttatcctctatgatggagttaggccttat 320
Query: 121 atgatcagtggaaggctttcatagtgaaaaatgtagctgcactccactctccagcaggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgatcagtggaaggctttcatagtgaaaaatgtagctgcactccactctccagcaggta 380
Query: 181 cacttggtattcctttctgactctccatcctgttttgcagatcttggacattctagcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacttggtattcctttctgactctccatcctgttttgcagatcttggacattctagcctt 440
Query: 241 atatgatgagccgtttctaaaagataaactaagtctctctctttctctttccccctctat 300
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 atatgatgagccatttctaaaaaataaactaagtctctctctttctctttccccctctat 500
Query: 301 ccccctttcctctctctctcctattagttgtgtttctctagagaaatcggacaatacact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccccctttcctctctctctcctattagttgtgtttctctagagaaatcggacaatacact 560
Query: 361 caacttccacttaatgtgaaaagcaaagcaaggaagactttagaaaatggcagcaaatta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caacttccacttaatgtgaaaagcaaagcaaggaagactttagaaaatggcagcaaatta 620
Query: 421 ggaattctgtacatttttttagtgaaaatttgaatctggagtatgcacatagaagtaacc 480
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 621 ggaattctgtacatttttttagtaaaaatttgaatctggaatatgcacatagaagtaacc 680
Query: 481 tcaaaagtgaagaaactgattaaaataaacatacatgttttaccaatttttt-gtatatt 539
||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||
Sbjct: 681 tcaaaagtgaagaaactgattaaaataaacatatatattttaccaatttttttgtatatt 740
Query: 540 tttgttgttgtcagacaaaaaaatttttttttggttt--gttttttttttt-tttttt 594
|||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||
Sbjct: 741 tttgttgttgtcagacaaaa----ttttttttgttttttgtttttttttttgtttttt 794
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
