Query= MSMg01no499_i18.b1 MSMg01no499_i18.b1 CHROMAT_FILE:
MSMg01no499_i18.b1 PHD_FILE: MSMg01no499_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:57 2005
(629 letters)
>mm_chr14_81679204_81680232
Length = 1029
Score = 1035 bits (535), Expect = 0.0
Identities = 608/639 (95%), Gaps = 16/639 (2%)
Strand = Plus / Plus
Query: 1 atatgtgtgtgtatgcattcatattagtgcttctgaggcagaccacaagtgtggttatgt 60
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 198 atatgtgcgtgtatgcattcatattagtgcttctgaggcagaccacaggtgtggttatgt 257
Query: 61 atatgaacacacatatgtatgtgcatatggaaactatagttcagtgttaggcatcccttt 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 258 atatgaacacacatatgtatgtgcatattgaaactatagttcagtgttaggcatctcttt 317
Query: 121 caataacttctcagacatagtttctgaaacaatatctttccctgaacctggaattcccca 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 caataacttctcaaacatagtttctgaaacaatatctttccctgaacctggaattcccca 377
Query: 181 atttagttcactgcctagaaatctagccccaagaatcctcctgttttgtttctccagtgt 240
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 atttagttctctgcatagaaatctagccccaagaatcctcctgttttgtttctccagtgt 437
Query: 241 tgggatttttt----atatgcttagggacacttggattttttttttt---gtggattctg 293
||||||| |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 438 tgggatt----ccagatatgcctagggacacttggattttttttttttttgtggattctg 493
Query: 294 gggatccaaaatcaggtattcatatctgaatgggaaacactttgtgaactgagccttctc 353
|||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 494 gggatccaaaatcaagtattcatatctgaatgggaaacactttatgaactgagccttctc 553
Query: 354 ccaaggatagggggaaaacactggccttatgtaaccaaggtgccttggtcttctcttctg 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ccaaggatagggggaaaacactggccttatgtaaccaaggtgccttggtcttctcttctg 613
Query: 414 taacaaaagtctttcaaatgacattgtattttacttatatgtgtgactctgcaatcgagg 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 taacaaaagtctttcaaatgacattgtattttacttatatgtgtgactctgcaatcgagg 673
Query: 474 tgcttttgtaagttcatgctaatttcacctgcaatcctgcttttctctctcctttctcct 533
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tgcttttgtaagtttatgctaatttcacctgcaatcctgcttttctctctcctttctcct 733
Query: 534 ctgtttctctctgtctctctctccctctgccttccttccttccttccttcctcttccttc 593
||||||||||||||||||||||| |||| || |||||||||||||||||||||| ||||
Sbjct: 734 ctgtttctctctgtctctctctctctct--ctgccttccttccttccttcctctttcttc 791
Query: 594 cttccttcctct-tcc--ttcccttcccttcccttccct 629
|||| ||||||| ||| |||||||||||||||||||||
Sbjct: 792 cttctttcctctctccccttcccttcccttcccttccct 830
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no499_i18.g1 MSMg01no499_i18.g1 CHROMAT_FILE:
MSMg01no499_i18.g1 PHD_FILE: MSMg01no499_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:57 2005
(676 letters)
>mm_chr14_81829800_81830875
Length = 1076
Score = 1112 bits (575), Expect = 0.0
Identities = 612/629 (97%), Gaps = 8/629 (1%)
Strand = Plus / Minus
Query: 1 tctgtagacaggctgggatgtccatttcaggacaggctactgcctccactgatcttggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tctgtagacaggctgggatgtccatttcaggacaggctactgcctccactgatcttggtt 570
Query: 61 acctttgccttatctttacctttgcaaagaaagaagctcaattgcattgaaattcaagag 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 569 acctttgccttatctttacctttgcaaagaaagaagctcaattgcatagaaattcaagag 510
Query: 121 gtgacatatcagagaagtcagcatgggaagtaattttacgtatagtttggggagaaaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gtgacatatcagagaagtcagcatgggaagtaattttacgtatagtttggggagaaaagt 450
Query: 181 aaaaatcaaaaccttgaaattaaaaataattacagaaacatgaaagttcatatgaagctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aaaaatcaaaaccttgaaattaaaaataattacagaaacatgaaagttcatatgaagctt 390
Query: 241 aaaagatttctagaaatctacatgatatgttttaaacaatggaaaaagtgtattgataat 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aaaagatttctagaaatctacttgatatgttttaaacaatggaaaaagtgtattgataat 330
Query: 301 gatggtaatatttcaaatgttggtgtttattttttagtttatacttcataatgttaatat 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 329 gatggtaatatttcaaatgttggtgtttattttttagtttatacttcacaatgttaatat 270
Query: 361 tcctctattcttctgttgaagtgtgtgttaaatattaatttggaagtttctacaatacct 420
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tcctctattctgctgctgaagtgtgtgttaaatattaatttggaagtttctacaatacct 210
Query: 421 tgaacaaatacatacacataaacacaaagatacacacacacgtgcacatgagcacacaca 480
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 209 taaacaaatacatacacataaacacaaagaaacacacacacgtgcacatgagcacacaca 150
Query: 481 a--------acacacagacacagacacacacacactttaagagaaaaaacaggtattgat 532
| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 agcacacagacacacagacacagacacacacacactttaagagaaaaaacaggtattgat 90
Query: 533 catcaaccagtttaaaatcaatgataccataattggaggaagagaataacaaatctattt 592
||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 89 catcaaccaatttaaaatcaatgatatcataattggaggaagagaataacaaatctattt 30
Query: 593 acacataacaagatcattataaatgtaat 621
|||||||||||||||||||||||||||||
Sbjct: 29 acacataacaagatcattataaatgtaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space: 709956
Effective search space used: 709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
